HHsearch alignment for GI: 254780873 and conserved domain: cd04247
>cd04247 AAK_AK-Hom3 AAK_AK-Hom3: Amino Acid Kinase Superfamily (AAK), AK-Hom3; this CD includes the N-terminal catalytic domain of the aspartokinase HOM3, a monofunctional class enzyme found in Saccharomyces cerevisiae and other related AK domains. Aspartokinase, the first enzyme in the aspartate metabolic pathway, catalyzes the conversion of aspartate and ATP to aspartylphosphate and ADP, and in fungi, is responsible for the production of threonine, isoleucine and methionine. S. cerevisiae has a single aspartokinase isoenzyme type, which is regulated by feedback, allosteric inhibition by L-threonine. Recent studies show that the allosteric transition triggered by binding of threonine to AK involves a large change in the conformation of the native hexameric enzyme that is converted to an inactive one of different shape and substantially smaller hydrodynamic size.
Probab=100.00 E-value=0 Score=539.44 Aligned_cols=238 Identities=29% Similarity=0.404 Sum_probs=200.9
Q ss_pred EEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC------CHHHHHHHHHHHHHC-----------------
Q ss_conf 699960858458889999999999999967998899980687------304899999998614-----------------
Q gi|254780873|r 3 RIVMKFGGTSVANIDCIRSAALHVKREVDRGQEVAMVVSAMS------GETDRLAELCRQVTS----------------- 59 (411)
Q Consensus 3 ~iV~KfGGtSv~~~~~i~~v~~~i~~~~~~g~~~ivVvSA~~------g~Td~L~~l~~~~~~----------------- 59 (411)
T Consensus 2 ~iV~KFGGTSva~~--~~~~~~~I~~~~~~~~~vvVVvSA~~~~~~~~g~T~~L~~~~~~a~~~~~~~~~~~~~~i~~~h 79 (306)
T cd04247 2 WVVQKFGGTSVGKF--PDNIADDIVKAYLKGNKVAVVCSARSTGTKAEGTTNRLLQAADEALDAQEKAFHDIVEDIRSDH 79 (306)
T ss_pred CEEEEECHHHHHHH--HHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_conf 89997791408879--9999999987762799889998899798775686999999999887445367999999999999
Q ss_pred ---------------------------------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf ---------------------------------------89988999999831299999999999843998635673324
Q gi|254780873|r 60 ---------------------------------------IDNARERDVVISTGEQVSSGLMVLALQSLGIQAISLQGWQI 100 (411)
Q Consensus 60 ---------------------------------------~~~~~~~d~i~s~GE~~s~~l~a~~l~~~G~~a~~l~~~~~ 100 (411)
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~i~~~~~~L~~~l~~~~~l~e~~~~~~d~ils~GE~lSa~l~a~~L~~~Gi~a~~lDa~~~ 159 (306)
T cd04247 80 LAAARKFIKNPELQAELEEEINKECELLRKYLEAAKILSEISPRTKDLVISTGEKLSCRFMAAVLRDRGVDAEYVDLSHI 159 (306)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECHHHH
T ss_conf 99999973087889999999999999999999988761448878888998212789999999999977999499648995
Q ss_pred CCCCCCCCCCCCCC--CCCCCCHHHHHH--HCCEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHHCHHHHHHHCCHH
Q ss_conf 55121335520001--236210033431--06805860343335568424430686242899999884734556534614
Q gi|254780873|r 101 PIMTDSLHGMARIC--RVDEKKIVTHLK--KKQVVVITGFQGLSHDNSVTTLGRGGSDTSAVAIAAAIKADRCDIYTDVC 176 (411)
Q Consensus 101 ~i~t~~~~~~a~~~--~~~~~~l~~~l~--~~~v~v~~Gf~g~~~~g~~ttlgRGGSD~tA~~ia~~l~A~~~~i~tdV~ 176 (411)
T Consensus 160 -i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Vv~GFig~~~~G~~tTLGRgGSDySAaila~~l~A~~v~IwTDV~ 238 (306)
T cd04247 160 -VDLDFSIEALDQTFYDELAQVLGEKITACENRVPVVTGFFGNVPGGLLSQIGRGYTDLCAALCAVGLNADELQIWKEVD 238 (306)
T ss_pred -CCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCEEECCCCCHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf -1366763545505689999999998774169748960412546999877606897079999999976977899997787
Q ss_pred HHEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 40245842123441105679999999884031101378876433138526761123777776543545454
Q gi|254780873|r 177 GIYTTDPRIEPKAHLMKKISFEEMLEMSSLGAKVMQVRSVELAMLYKMCLFVRSSFEDHGQQEQLGTLICS 247 (411)
Q Consensus 177 Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~ipi~i~ntf~~~~~~~~~GT~I~~ 247 (411)
T Consensus 239 Gi~taDPr~V~~A~~i~~lsy~EA~eLa~~GakVlHP~ti~P~~~~~IPi~Irnt~~----P~~~GT~I~~ 305 (306)
T cd04247 239 GIFTADPRKVPTARLLPSITPEEAAELTYYGSEVIHPFTMEQVIKARIPIRIKNVEN----PRGEGTVIYP 305 (306)
T ss_pred CCCCCCCCCCCCCEECCEECHHHHHHHHHCCCCCCCHHHHHHHHHCCCCEEECCCCC----CCCCCCEECC
T ss_conf 545479875789836572189999999967973159899999998799489818999----8999736568