HHsearch alignment for GI: 254780873 and conserved domain: cd04249
>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.54 E-value=4.6e-13 Score=107.87 Aligned_cols=215 Identities=14% Similarity=0.172 Sum_probs=139.1
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCHHHHHHHHHHHHHCCC-----CHHHHHHHH-HHHHHH
Q ss_conf 99960858458889999999999999967-99889998068730489999999861489-----988999999-831299
Q gi|254780873|r 4 IVMKFGGTSVANIDCIRSAALHVKREVDR-GQEVAMVVSAMSGETDRLAELCRQVTSID-----NARERDVVI-STGEQV 76 (411)
Q Consensus 4 iV~KfGGtSv~~~~~i~~v~~~i~~~~~~-g~~~ivVvSA~~g~Td~L~~l~~~~~~~~-----~~~~~d~i~-s~GE~~ 76 (411)
T Consensus 1 iVIK~GG~~l~~~~~~~~~~~~i~~l~~~~~~~vVlVHGggpqI~~~l~~~gi~~~f~~G~RvTd~~tl~vv~~vl~g~v 80 (252)
T cd04249 1 LVIKLGGALLETEAALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKKNGLRVTPKEQIPYITGALAGTA 80 (252)
T ss_pred CEEEECCHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCH
T ss_conf 98997824617888999999999999981898769987996899999997699972379656589999999999984615
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCCC----CCCCC-CCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEECCC
Q ss_conf 99999999984399863567332455121----33552-00012362100334310680586034333556842443068
Q gi|254780873|r 77 SSGLMVLALQSLGIQAISLQGWQIPIMTD----SLHGM-ARICRVDEKKIVTHLKKKQVVVITGFQGLSHDNSVTTLGRG 151 (411)
Q Consensus 77 s~~l~a~~l~~~G~~a~~l~~~~~~i~t~----~~~~~-a~~~~~~~~~l~~~l~~~~v~v~~Gf~g~~~~g~~ttlgRG 151 (411)
T Consensus 81 n-~~lv~~l~~~g~~a~gl~~~dg~~~~~~~~~~dlG~vG~v~~Vn~~~i~~ll~~g~IPVisp-lg~~~~G~~~NiN-- 156 (252)
T cd04249 81 N-KQLMAQAIKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISS-IGADDQGQLMNVN-- 156 (252)
T ss_pred H-HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECHHHHHHHHCCCCCCEECC-CEECCCCCEEECC--
T ss_conf 9-99999997358986204456774687302366678655532355789999862898747635-3148999879759--
Q ss_pred CCCHHHHHHHHHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHHC-----CCCCHHHHHHHHHHHCCC-E
Q ss_conf 6242899999884734556534614402458421234411056799999998840-----311013788764331385-2
Q gi|254780873|r 152 GSDTSAVAIAAAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSL-----GAKVMQVRSVELAMLYKM-C 225 (411)
Q Consensus 152 GSD~tA~~ia~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~-----Gakvlhp~~~~~~~~~~i-p 225 (411)
T Consensus 157 -aD~~A~~iA~aL~A~-Li~ltdv~Gvld~------~g~li~~l~~~e~~~li~~~~i~gGMi-pKl~aa~~Al~~gv~~ 227 (252)
T cd04249 157 -ADQAATAIAQLLNAD-LVLLSDVSGVLDA------DKQLISELNAKQAAELIEQGVITDGMI-VKVNAALDAAQSLRRG 227 (252)
T ss_pred -HHHHHHHHHHHHCCC-EEEEECCCCEECC------CCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHCCCCE
T ss_conf -999999999971598-9999688613889------998942189999999997595479739-9999999999819987
Q ss_pred EEEECC
Q ss_conf 676112
Q gi|254780873|r 226 LFVRSS 231 (411)
Q Consensus 226 i~i~nt 231 (411)
T Consensus 228 v~I~~g 233 (252)
T cd04249 228 IDIASW 233 (252)
T ss_pred EEEECC
T ss_conf 999438