HHsearch alignment for GI: 254780873 and conserved domain: cd04249

>cd04249 AAK_NAGK-NC AAK_NAGK-NC: N-Acetyl-L-glutamate kinase - noncyclic (NAGK-NC) catalyzes the phosphorylation of the gamma-COOH group of N-acetyl-L-glutamate (NAG) by ATP in the second step of microbial arginine biosynthesis using the acetylated, noncyclic route of ornithine biosynthesis. There are two variants of this pathway. In one, typified by the pathway in Escherichia coli, glutamate is acetylated by acetyl-CoA and acetylornithine is deacylated hydrolytically. In this pathway, feedback inhibition by arginine occurs at the initial acetylation of glutamate and not at the phosphorylation of NAG by NAGK. Homodimeric NAGK-NC are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.54  E-value=4.6e-13  Score=107.87  Aligned_cols=215  Identities=14%  Similarity=0.172  Sum_probs=139.1

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCHHHHHHHHHHHHHCCC-----CHHHHHHHH-HHHHHH
Q ss_conf             99960858458889999999999999967-99889998068730489999999861489-----988999999-831299
Q gi|254780873|r    4 IVMKFGGTSVANIDCIRSAALHVKREVDR-GQEVAMVVSAMSGETDRLAELCRQVTSID-----NARERDVVI-STGEQV   76 (411)
Q Consensus         4 iV~KfGGtSv~~~~~i~~v~~~i~~~~~~-g~~~ivVvSA~~g~Td~L~~l~~~~~~~~-----~~~~~d~i~-s~GE~~   76 (411)
T Consensus         1 iVIK~GG~~l~~~~~~~~~~~~i~~l~~~~~~~vVlVHGggpqI~~~l~~~gi~~~f~~G~RvTd~~tl~vv~~vl~g~v   80 (252)
T cd04249           1 LVIKLGGALLETEAALEQLFSALSEYQQQHNRQLVIVHGGGCVVDELLKKLNFPSEKKNGLRVTPKEQIPYITGALAGTA   80 (252)
T ss_pred             CEEEECCHHCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHCCCCCCCCCCEEECCHHHHHHHHHHHCCCH
T ss_conf             98997824617888999999999999981898769987996899999997699972379656589999999999984615


Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCCCC----CCCCC-CCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEEEECCC
Q ss_conf             99999999984399863567332455121----33552-00012362100334310680586034333556842443068
Q gi|254780873|r   77 SSGLMVLALQSLGIQAISLQGWQIPIMTD----SLHGM-ARICRVDEKKIVTHLKKKQVVVITGFQGLSHDNSVTTLGRG  151 (411)
Q Consensus        77 s~~l~a~~l~~~G~~a~~l~~~~~~i~t~----~~~~~-a~~~~~~~~~l~~~l~~~~v~v~~Gf~g~~~~g~~ttlgRG  151 (411)
T Consensus        81 n-~~lv~~l~~~g~~a~gl~~~dg~~~~~~~~~~dlG~vG~v~~Vn~~~i~~ll~~g~IPVisp-lg~~~~G~~~NiN--  156 (252)
T cd04249          81 N-KQLMAQAIKAGLKPVGLSLADGGMTAVTQLDPELGAVGKATANDPSLLNDLLKAGFLPIISS-IGADDQGQLMNVN--  156 (252)
T ss_pred             H-HHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCCEEEECHHHHHHHHCCCCCCEECC-CEECCCCCEEECC--
T ss_conf             9-99999997358986204456774687302366678655532355789999862898747635-3148999879759--


Q ss_pred             CCCHHHHHHHHHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHHC-----CCCCHHHHHHHHHHHCCC-E
Q ss_conf             6242899999884734556534614402458421234411056799999998840-----311013788764331385-2
Q gi|254780873|r  152 GSDTSAVAIAAAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSL-----GAKVMQVRSVELAMLYKM-C  225 (411)
Q Consensus       152 GSD~tA~~ia~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~-----Gakvlhp~~~~~~~~~~i-p  225 (411)
T Consensus       157 -aD~~A~~iA~aL~A~-Li~ltdv~Gvld~------~g~li~~l~~~e~~~li~~~~i~gGMi-pKl~aa~~Al~~gv~~  227 (252)
T cd04249         157 -ADQAATAIAQLLNAD-LVLLSDVSGVLDA------DKQLISELNAKQAAELIEQGVITDGMI-VKVNAALDAAQSLRRG  227 (252)
T ss_pred             -HHHHHHHHHHHHCCC-EEEEECCCCEECC------CCCCCCCCCHHHHHHHHHCCCCCCCCH-HHHHHHHHHHHCCCCE
T ss_conf             -999999999971598-9999688613889------998942189999999997595479739-9999999999819987


Q ss_pred             EEEECC
Q ss_conf             676112
Q gi|254780873|r  226 LFVRSS  231 (411)
Q Consensus       226 i~i~nt  231 (411)
T Consensus       228 v~I~~g  233 (252)
T cd04249         228 IDIASW  233 (252)
T ss_pred             EEEECC
T ss_conf             999438