HHsearch alignment for GI: 254780873 and conserved domain: cd04255
>cd04255 AAK_UMPK-MosAB AAK_UMPK-MosAB: This CD includes the alpha and beta subunits of the Mo storage protein (MosA and MosB) which are related to uridine monophosphate kinase (UMPK) enzymes that catalyze the phosphorylation of UMP by ATP, yielding UDP, and playing a key role in pyrimidine nucleotide biosynthesis. The Mo storage protein from the nitrogen-fixing bacterium, Azotobacter vinelandii, is characterized as an alpha4-beta4 octamer containing a polynuclear molybdenum-oxide cluster which is ATP-dependent to bind Mo and pH-dependent to release Mo. These and related bacterial sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=99.77 E-value=2.5e-17 Score=136.59 Aligned_cols=215 Identities=18% Similarity=0.231 Sum_probs=148.8
Q ss_pred EEEEEECCCCCCC--HHHHHHHHHHHHHHHHCCCCEEEEEECCCCH-HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 6999608584588--8999999999999996799889998068730-489999999861489988999999831299999
Q gi|254780873|r 3 RIVMKFGGTSVAN--IDCIRSAALHVKREVDRGQEVAMVVSAMSGE-TDRLAELCRQVTSIDNARERDVVISTGEQVSSG 79 (411)
Q Consensus 3 ~iV~KfGGtSv~~--~~~i~~v~~~i~~~~~~g~~~ivVvSA~~g~-Td~L~~l~~~~~~~~~~~~~d~i~s~GE~~s~~ 79 (411)
T Consensus 32 ~~VvKIGGqsi~DrG~~av~Plv~Ei~~~~~~-hk~li~TG--gG~RaRHiy~igldLg-mPt-GvLa~L~~~vs~QNa~ 106 (262)
T cd04255 32 LNVVKIGGQSIIDRGAEAVLPLVEEIVALRPE-HKLLILTG--GGTRARHVYSIGLDLG-MPT-GVLAKLGASVSEQNAE 106 (262)
T ss_pred CEEEEECCEEEECCCHHHHHHHHHHHHHHHHH-CCEEEEEC--CCHHHHHHHHHHHCCC-CCH-HHHHHHHHHHHHHHHH
T ss_conf 22899878030037334243289999975131-52899836--7500334312341479-961-1567764224464799
Q ss_pred HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEECCCCCCCCCCEE------EECCCCC
Q ss_conf 9999998439986356733245512133552000123621003343106805860343335568424------4306862
Q gi|254780873|r 80 LMVLALQSLGIQAISLQGWQIPIMTDSLHGMARICRVDEKKIVTHLKKKQVVVITGFQGLSHDNSVT------TLGRGGS 153 (411)
Q Consensus 80 l~a~~l~~~G~~a~~l~~~~~~i~t~~~~~~a~~~~~~~~~l~~~l~~~~v~v~~Gf~g~~~~g~~t------tlgRGGS 153 (411)
T Consensus 107 ml~~LLa~~G~~~i--~~~------------------~~~~l~~~l~~~~~~v~~g~---PPY~~~e~p~~~g~IPphRT 163 (262)
T cd04255 107 MLATLLAKHGGSKV--GHG------------------DLLQLPTFLKAGRAPVISGM---PPYGLWEHPAEEGRIPPHRT 163 (262)
T ss_pred HHHHHHCCCCCEEE--CCC------------------CHHHHHHHHHCCCEEEEECC---CCCCCCCCCCCCCCCCCCCC
T ss_conf 99998431387025--787------------------78999999865871044279---99754547865687899754
Q ss_pred CHHHHHHHHHHCHHHHHHHCCHHHHEECCCCCCCCCCEECCCCHHHHHHHHHCCCCCHHHHHHHHHHHCC--CEEEEECC
Q ss_conf 4289999988473455653461440245842123441105679999999884031101378876433138--52676112
Q gi|254780873|r 154 DTSAVAIAAAIKADRCDIYTDVCGIYTTDPRIEPKAHLMKKISFEEMLEMSSLGAKVMQVRSVELAMLYK--MCLFVRSS 231 (411)
Q Consensus 154 D~tA~~ia~~l~A~~~~i~tdV~Gi~taDPr~v~~a~~i~~lsy~Ea~eLa~~Gakvlhp~~~~~~~~~~--ipi~i~nt 231 (411)
T Consensus 164 DtGAfLlAe~iGa~~li~vkdVDGvYtaDPk~~~~A~~i~~iS~~Ell~~-~L~dlv~er~~l~ll~~a~~i~~VqVvNg 242 (262)
T cd04255 164 DVGAFLLAEVIGARNLIFVKDEDGLYTADPKKNKKAEFIPEISAAELLKK-DLDDLVLERPVLDLLQNARHVKEVQIVNG 242 (262)
T ss_pred CHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCEECCCCCHHHHHHC-CCCCCCHHHHHHHHHHHHCCCCEEEEEEC
T ss_conf 38999999984875379996577776799999976534253779999863-47643005999999986113551799807
Q ss_pred CCCCC-----CCCCCCCCCC
Q ss_conf 37777-----7654354545
Q gi|254780873|r 232 FEDHG-----QQEQLGTLIC 246 (411)
Q Consensus 232 f~~~~-----~~~~~GT~I~ 246 (411)
T Consensus 243 l~PGnitrAL~GEhVGTiIr 262 (262)
T cd04255 243 LVPGNLTRALRGEHVGTIIR 262 (262)
T ss_pred CCCCHHHHHHCCCCCCCEEC
T ss_conf 88537999872686641009