HHsearch alignment for GI: 254780874 and conserved domain: PRK00578

>PRK00578 prfB peptide chain release factor 2; Validated.
Probab=100.00  E-value=0  Score=928.12  Aligned_cols=338  Identities=36%  Similarity=0.535  Sum_probs=318.8

Q ss_pred             HHHHHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
Q ss_conf             9899999999999998538531579---9999999987999999999999999989999999720378535665433222
Q gi|254780874|r    7 KQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEV   83 (357)
Q Consensus         7 ~kL~~l~~rl~ELE~~Lsdp~~w~d---~~klsKe~s~L~~iv~~~~~~~~~~~ei~el~eLl~e~e~D~El~elAeeEl   83 (357)
T Consensus        23 ldle~l~~rl~ELe~~lsdP~~W~D~~~a~kl~kE~~~L~~~v~~~~~l~~~~~dl~~l~eL~~e-e~D~el~eea~~el  101 (367)
T PRK00578         23 LDVDALKERLEELEAEAEDPDFWNDQERAQKVGKELSSLKAKLDTLENLRQRLDDLEELLELAEE-EDDEETLAEAEAEL  101 (367)
T ss_pred             CCHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCCHHHHHHHHHHH
T ss_conf             79999999999999986397054499999999999999999999999999999999999999864-99989999999999


Q ss_pred             HHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEE
Q ss_conf             33200057788899986400011355403788622688521788999999999999876498400132113544772111
Q gi|254780874|r   84 LAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEI  163 (357)
Q Consensus        84 ~~l~~~l~~le~eL~~~LLpsde~D~~nailEI~aGaGG~EA~dwA~~L~rMY~r~ae~~gwk~eii~~~~ge~aGik~v  163 (357)
T Consensus       102 ~~l~~~l~~lE----l~~Llsd~~D~~naileI~aGaGG~EA~~~a~~L~rMY~r~ae~~g~k~~v~~~~~~~~~Gik~~  177 (367)
T PRK00578        102 KALEKKLAALE----LERLLSGEYDANNAILTIHAGAGGTEAQDWASMLLRMYLRWAERHGFKVEVLDYSEGEEAGIKSA  177 (367)
T ss_pred             HHHHHHHHHHH----HHHCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCEE
T ss_conf             99999999999----98604898867884799984899607889999999999999987588631410377655660058


Q ss_pred             EEEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECCCC-CCCCCCCCEEEEEEECCCCCCCCCCCCCCC
Q ss_conf             3777503111210002465026761254567851101688885303343-322245434799985288875200063212
Q gi|254780874|r  164 VATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDS  242 (357)
Q Consensus       164 ~~~I~G~~aYg~Lk~E~GvHRvqRip~~es~gR~hTS~a~V~V~P~~~~-~~~~i~~~dl~i~~~rssG~GGQ~vN~t~s  242 (357)
T Consensus       178 ~~~i~G~~ayg~Lk~E~GvHRv~Ri~~~es~gr~hTS~a~V~V~P~~~~~~~i~i~~~dl~id~~RssGaGGQ~VNkt~s  257 (367)
T PRK00578        178 TLKIKGPYAYGYLKSEKGVHRLVRISPFDSAGRRHTSFASVEVYPEVDDDIEIEINPKDLRIDTYRSSGAGGQHVNKTDS  257 (367)
T ss_pred             EEEEECCCHHHHHCCCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCC
T ss_conf             99983465343322257621356469857888657775699996267764357788213358986468998777575233


Q ss_pred             EEEEEECCCCEEE-EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCC-CCCCEEEEE
Q ss_conf             1588964984488-84365413589999999999999999999999998744652246742382210448-998112432
Q gi|254780874|r  243 AVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNF-SQGRITDHR  320 (357)
Q Consensus       243 avri~H~ptgi~v-~~~eRsQ~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r~~~~g~~~rs~~iRtY~~-~~~rv~DhR  320 (357)
T Consensus       258 AVRitH~PTGivv~cq~eRSQ~~Nk~~A~~~L~akL~~~~~~~~~~~~~~~r~~~~~~-~~g~~IRtY~f~p~~rV~DhR  336 (367)
T PRK00578        258 AVRITHIPTGIVVQCQNERSQHQNKASAMKMLKAKLYELELEKRAAEKDALRGEKKDI-GWGSQIRSYVLHPYQMVKDLR  336 (367)
T ss_pred             EEEEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCCCCCCCCCCCC
T ss_conf             3799972586499955602189899999999999999999999999999976441357-653656442478987474005


Q ss_pred             CCCEECCHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf             164417877872886699999999999999
Q gi|254780874|r  321 INLTLYKLEYVLQGYIDDIINPLLTAHQAK  350 (357)
Q Consensus       321 ~~~~~~~~~~~l~G~l~~~i~~~~~~~~~~  350 (357)
T Consensus       337 ~~~~~~~l~~vl~G~ld~~I~a~L~~~~~~  366 (367)
T PRK00578        337 TGYETGNTQAVLDGDLDGFIEAYLRWRLSS  366 (367)
T ss_pred             CCCEECCHHHHHCCCHHHHHHHHHHHHHHC
T ss_conf             697357757874888599999999877447