HHsearch alignment of GI: 254780874 and MMDB domain: 1rq0_A_192-273
>1rq0_A (A:192-273) RF-1, peptide chain release factor 1; X-RAY, crystal, peptide release factor 1, ribosome, structural genomics, BSGC structure funded by NIH; 2.65A {Thermotoga maritima}
Probab=99.92 E-value=1.1e-25 Score=205.45 Aligned_cols=80 Identities=54% Similarity=0.824 Sum_probs=73.3
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEE-EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2454347999852888752000632121588964984488-843654135899999999999999999999999987446
Q gi|254780874|r 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294 (357)
Q Consensus 216 ~i~~~dl~i~~~rssG~GGQ~vN~t~savri~H~ptgi~v-~~~eRsQ~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r~ 294 (357)
+|+++||+|+|+|||||||||||||+|||||+|+||||+| |+++|||++||..||.+|+++|++...++...+....++
T Consensus 1 ~I~~~dl~~~~~rssGpGGQ~VNkt~s~V~l~h~ptgi~v~~~~~RSq~~Nk~~A~~rL~~~L~~~~~~~~~~~~~~~~~ 80 (82)
T 1rq0_A 1 EIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKEREISQKRK 80 (82)
T ss_dssp CCCGGGEEEEEECCCC----CCSSSSEEEEEEETTTCCEEEEEESSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCC---
T ss_pred EECCCCEEEEECCCCCHHCCHHHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 76520314652036410001132444024799869860887035664448999999999999999999999999999876
Q ss_pred H
Q ss_conf 5
Q gi|254780874|r 295 L 295 (357)
Q Consensus 295 ~ 295 (357)
.
T Consensus 81 ~ 81 (82)
T 1rq0_A 81 S 81 (82)
T ss_dssp -
T ss_pred C
T ss_conf 1