HHsearch alignment of GI: 254780874 and MMDB domain: 2jy9_A_
>2jy9_A (A:) Putative tRNA hydrolase domain; GFT protein structure, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=99.95 E-value=1.9e-28 Score=225.40 Aligned_cols=114 Identities=23% Similarity=0.289 Sum_probs=95.7
Q ss_pred ECCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEEEE------------------------ECCCCEEEEE-CCCCC
Q ss_conf 0334332224543479998528887520006321215889------------------------6498448884-36541
Q gi|254780874|r 208 PEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRIT------------------------HIPTGIMVTS-SEKSQ 262 (357)
Q Consensus 208 P~~~~~~~~i~~~dl~i~~~rssG~GGQ~vN~t~savri~------------------------H~ptgi~v~~-~eRsQ 262 (357)
|+++ .++.|+++||+|.|+|||||||||||||+|+|+|+ |+||||+|.| ++|||
T Consensus 2 ~~~~-~~i~I~~~~l~~~f~RSsGpGGQ~VNKt~skV~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~v~s~~~RsQ 80 (148)
T 2jy9_A 2 IAIS-RTVSIADNELEITAIRAQGAGGQHVNKTSSAIHLRFDIRASGLPEYYKQRLLTASHHLISDDGVIIIKAQEFRSQ 80 (148)
T ss_dssp BCCS-SSCCBCSTTCEEEEECCSCCCSSCSCSCSCEEEEEECSTTSCCCHHHHHHHHHSCCTTBCSSSCEEEEECSSSCH
T ss_pred CCCC-CCCCCCHHHEEEEEEECCCCCCCCCCHHCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCH
T ss_conf 4347-878257699078988767998764012220147897314467997999999997454545897189997675899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHCCCCCCCC--CEEECCC-CCCCEEEEECC
Q ss_conf 358999999999999999999999999-----874465224674238--2210448-99811243216
Q gi|254780874|r 263 HQNRLRAMKVLRARLYDVERKRMANER-----SANRKLQIGSGDRSE--RIRTYNF-SQGRITDHRIN 322 (357)
Q Consensus 263 ~~Nk~~A~~~L~~~l~~~~~~~~~~~~-----~~~r~~~~g~~~rs~--~iRtY~~-~~~rv~DhR~~ 322 (357)
++|++.||.+|++.|.+...+...... .+.|+.+.+...||+ ++|+||| ++++|+||||+
T Consensus 81 ~~N~~~al~kL~~~l~~~~~~~k~~~~~~~~~~~~r~rl~~Kk~rs~~K~~R~~~~~~~~~~~d~~~~ 148 (148)
T 2jy9_A 81 ELNREAAIARLVAVIKELTAEQKSRRATRPTRASKERRLSSKAQKSSVKALRGKVRRPLDLEHHHHHH 148 (148)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCTTCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCC
T ss_conf 99999999999999998650777622467467899999999999899986248988975410101469