HHsearch alignment of GI: 254780874 and MMDB domain: 3d5a_X_1-99_332-354
>3d5a_X (X:1-99,X:332-354) RF1, peptide chain release factor 1; ribosome, coiled coil, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding; 3.21A {Thermus thermophilus HB27} PDB: 2b64_Y 3d5c_X
Probab=99.25 E-value=5.8e-11 Score=99.27 Aligned_cols=96 Identities=24% Similarity=0.422 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
Q ss_conf 89899999999999998538531579---999999998799999999999999998999999972037853566543322
Q gi|254780874|r 6 HKQICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIE 82 (357)
Q Consensus 6 ~~kL~~l~~rl~ELE~~Lsdp~~w~d---~~klsKe~s~L~~iv~~~~~~~~~~~ei~el~eLl~e~e~D~El~elAeeE 82 (357)
.++|+.+..|+.+|+.++++|+||+| ++++++++++|+++++.|+.|.+...++.++.+|. +|+++.+++.+|
T Consensus 2 ~~rLe~l~~r~~eLe~~lsdp~fw~D~~~a~~i~kE~~~L~~~v~~y~~l~~~~~di~el~el~----~D~e~~ela~eE 77 (122)
T 3d5a_X 2 LDKLDRLEEEYRELEALLSDPEVLKDKGRYQSLSRRYAEMGEVIGLIREYRKVLEDLEQAESLL----DDPELKEMAKAE 77 (122)
T ss_dssp HHHHHHHTHHHHHHHHHTTSTTTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST----TCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HCHHHHHHHHHH
T ss_conf 1579999999999999870984223999999999999999999999999999999899999985----082211246789
Q ss_pred HHHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 23320005778889998640001
Q gi|254780874|r 83 VLAIEKEIRELENEINYLLLPKD 105 (357)
Q Consensus 83 l~~l~~~l~~le~eL~~~LLpsd 105 (357)
+..+...++.++.+|+.+|+|+-
T Consensus 78 l~~L~~~i~~lE~~L~~lLlPK~ 100 (122)
T 3d5a_X 78 REALLARKEALEKELERHLLPKL 100 (122)
T ss_dssp HHHHHHHHHHHHHHHHHHHSTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHCCH
T ss_conf 98765457789999999840343