HHsearch alignment of GI: 254780874 and MMDB domain: 3d5a_X_211-296
>3d5a_X (X:211-296) RF1, peptide chain release factor 1; ribosome, coiled coil, ribonucleoprotein, ribosomal protein, RNA-binding, rRNA-binding; 3.21A {Thermus thermophilus HB27} PDB: 2b64_Y 3d5c_X
Probab=99.93 E-value=2.5e-26 Score=210.11 Aligned_cols=85 Identities=52% Similarity=0.807 Sum_probs=81.2
Q ss_pred CCCCCEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEE-EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 2454347999852888752000632121588964984488-843654135899999999999999999999999987446
Q gi|254780874|r 216 DIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRK 294 (357)
Q Consensus 216 ~i~~~dl~i~~~rssG~GGQ~vN~t~savri~H~ptgi~v-~~~eRsQ~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r~ 294 (357)
.|+++||+|+|+|||||||||||||+|||||+|+||||+| |+++|||++||+.||.+|+++|++...+++..+....++
T Consensus 1 sI~~~dl~~~~~rssGpGGQ~VNk~~t~V~i~h~ptgi~v~~~~~RSq~~Nr~~A~~~L~~~L~~~~~~~~~~~~~~~~k 80 (86)
T 3d5a_X 1 ALNMDEIRIDVMRASGPGGQGVNTTDSAVRVVHLPTGIMVTCQDSRSQIKNREKALMILRSRLLEMKRAEEAERLRKTRL 80 (86)
T ss_dssp CCCGGGEEEEEECCCSCCHHHHHHCCCEEEEEETTTTEEEEECCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCCCCCHHHHHHHCCEEEECCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 55542100332036752100156674033579758876998133214489999999999999999999889999999887
Q ss_pred HHCCCC
Q ss_conf 522467
Q gi|254780874|r 295 LQIGSG 300 (357)
Q Consensus 295 ~~~g~~ 300 (357)
.++++|
T Consensus 81 ~~~~rG 86 (86)
T 3d5a_X 81 AQIGTG 86 (86)
T ss_dssp HHSCGG
T ss_pred HCCCCC
T ss_conf 137434