HHsearch results for GI: 254780874 and protein with PDBid: 1gqe_A
>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z*
Probab=100.00 E-value=0 Score=938.62 Aligned_cols=331 Identities=34% Similarity=0.548 Sum_probs=307.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 899999999999998538531579---99999999879999999999999999899999997203785356654332223
Q gi|254780874|r 8 QICDLKNRFAEIELRMSESPSVDA---YIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84 (357)
Q Consensus 8 kL~~l~~rl~ELE~~Lsdp~~w~d---~~klsKe~s~L~~iv~~~~~~~~~~~ei~el~eLl~e~e~D~El~elAeeEl~ 84 (357)
.++.++.|+.+|+.+|++|+||+| +++++|+++.|+++++.|+.|.+...++.++.+|+.++ +|+++.+++..++.
T Consensus 26 d~d~~~~rl~eLe~~l~~p~~w~D~~~a~kl~ke~~~L~~~v~~~~~l~~~~~dl~el~el~~ee-~d~e~~~e~~~el~ 104 (365)
T 1gqe_A 26 DYDAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELAVEA-DDEETFNEAVAELD 104 (365)
T ss_dssp THHHHHHHHHHHHHHHHSGGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-TCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
T ss_conf 98999999999999864972554999999999999999999999999999999899999887601-32788999999999
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEE
Q ss_conf 32000577888999864000113554037886226885217889999999999998764984001321135447721113
Q gi|254780874|r 85 AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164 (357)
Q Consensus 85 ~l~~~l~~le~eL~~~LLpsde~D~~nailEI~aGaGG~EA~dwA~~L~rMY~r~ae~~gwk~eii~~~~ge~aGik~v~ 164 (357)
.+...++. |+..++|+||+|.+||||||||||||+||||||+||||||+|||+++||+++++++++|+.||||+|+
T Consensus 105 ~l~~~l~~----le~~ll~~d~~D~~nailEIrAGaGG~EA~dfA~~L~RMY~ryAE~kgwk~evid~~~~e~gGik~v~ 180 (365)
T 1gqe_A 105 ALEEKLAQ----LEFRRMFSGEYDSADCYLDIQAGSGGTEAQDWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVT 180 (365)
T ss_dssp HHHHHHHH----HGGGGGCCSTTTTSCEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEEEEECSSSSEEEEE
T ss_pred HHHHHHHH----HHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCEEEEE
T ss_conf 99999999----87513689966555745999847996899999999999999999985992589861677767327999
Q ss_pred EEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECC-CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCE
Q ss_conf 7775031112100024650267612545678511016888853033-433222454347999852888752000632121
Q gi|254780874|r 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243 (357)
Q Consensus 165 ~~I~G~~aYg~Lk~E~GvHRvqRip~~es~gR~hTS~a~V~V~P~~-~~~~~~i~~~dl~i~~~rssG~GGQ~vN~t~sa 243 (357)
|.|+|+||||+||+|+||||||||||||++||||||||||+|+|++ ++++++|+|+||||||||||||||||||||+||
T Consensus 181 ~~I~G~~aYg~Lk~EsGVHRvqRvp~tes~gR~HTS~asV~V~P~~~~~~~i~i~~~Dl~id~~rssG~GGQ~vNkt~sa 260 (365)
T 1gqe_A 181 IKISGDYAYGWLRTETGVHRLVRKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESA 260 (365)
T ss_dssp EEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEECCBTTBCCCCCGGGEEEEEECCCCSSCCSTTSSCCE
T ss_pred EEEECCCHHHHHHHCCCCEEEEECCCCCCCCCEEEEEEEEEEECCCCCCCCEECCHHHEEEEEEECCCCCCCCCCCCCCE
T ss_conf 99974672566631487303675688688884798667899825788764043165782798655688876765653434
Q ss_pred EEEEECCCCEEE-EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCCCCCCCCEEECCCCCCCEEEEE
Q ss_conf 588964984488-84365413589999999999999999999999998744--652246742382210448998112432
Q gi|254780874|r 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANR--KLQIGSGDRSERIRTYNFSQGRITDHR 320 (357)
Q Consensus 244 vri~H~ptgi~v-~~~eRsQ~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r--~~~~g~~~rs~~iRtY~~~~~rv~DhR 320 (357)
|||||+||||+| ||+|||||+||++||++|++|||+++.+++.++....| +.++| ||+||||||||||||||||
T Consensus 261 Vri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~---~g~~IRtYnf~~~rVtDhR 337 (365)
T 1gqe_A 261 VRITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIG---WGSQIRSYVLDDSRIKDLR 337 (365)
T ss_dssp EEEEETTTCCEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSTTCCCCC---SCSEEEEEEGGGTEEEETT
T ss_pred EEEEEECCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC---CCCCCCCCCCCCCCCEECC
T ss_conf 8999707864999606020477899999999999999999999999999884311355---7698567548998140306
Q ss_pred CCCEECCHHHHHCCCHHHHHHHHHHH
Q ss_conf 16441787787288669999999999
Q gi|254780874|r 321 INLTLYKLEYVLQGYIDDIINPLLTA 346 (357)
Q Consensus 321 ~~~~~~~~~~~l~G~l~~~i~~~~~~ 346 (357)
||++++|+++||+|+||+||++|+.+
T Consensus 338 ~~~~~~~~~~vl~G~ld~~i~a~l~~ 363 (365)
T 1gqe_A 338 TGVETRNTQAVLDGSLDQFIEASLKA 363 (365)
T ss_dssp TCCEESCHHHHHTTCCHHHHHHHHHT
T ss_pred CCCEECCHHHHHCCCHHHHHHHHHHC
T ss_conf 59745786787698759999999977