HHsearch results for GI: 254780874 and protein with PDBid: 2ihr_1
>2ihr_1 Peptide chain release factor 2; mixed alpha-beta, translation; 2.50A {Thermus thermophilus} PDB: 2b9m_Y* 3f1e_X 3f1g_X 2x9r_Y* 2x9t_Y* 2jl5_Y 2jl7_Y 2wh1_Y 2wh3_Y
Probab=100.00 E-value=0 Score=909.30 Aligned_cols=336 Identities=34% Similarity=0.499 Sum_probs=306.8
Q ss_pred HHHHHHHHHHHHHHHHCCCCCHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
Q ss_conf 89999999999999853853157999---999999879999999999999999899999997203785356654332223
Q gi|254780874|r 8 QICDLKNRFAEIELRMSESPSVDAYI---KLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDHNSDSEIRDLAQIEVL 84 (357)
Q Consensus 8 kL~~l~~rl~ELE~~Lsdp~~w~d~~---klsKe~s~L~~iv~~~~~~~~~~~ei~el~eLl~e~e~D~El~elAeeEl~ 84 (357)
.++.++.|+.+|+.+|++|+||+|+. +++|+++.|+++++.|+.+. +++.++.+|+.+ .|+++.++++.|+.
T Consensus 18 Dle~~~~rl~ELE~~lsdP~fW~D~~kA~kl~KE~s~L~~iV~~~~~l~---~~ledl~EL~ee--~d~E~~e~~~~El~ 92 (365)
T 2ihr_1 18 DIPQKETRLKELERRLEDPSLWNDPEAARKVSQEAARLRRTVDTFRSLE---SDLQGLLELMEE--LPAEEREALKPELE 92 (365)
T ss_dssp SHHHHHHHHTTTTTSTTCGGGTTTGGGSSSTTHHHHHTHHHHHHHHHHH---HHTTTHHHHTTC--SCCTTGGGTGGGTH
T ss_pred CHHHHHHHHHHHHHHHCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_conf 9999999999999987198044499999999999999999999999999---999999999863--01536889987443
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCCEEE
Q ss_conf 32000577888999864000113554037886226885217889999999999998764984001321135447721113
Q gi|254780874|r 85 AIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIV 164 (357)
Q Consensus 85 ~l~~~l~~le~eL~~~LLpsde~D~~nailEI~aGaGG~EA~dwA~~L~rMY~r~ae~~gwk~eii~~~~ge~aGik~v~ 164 (357)
.+.+.++.++ ..++|+||+|.+||||||||||||+||||||+||||||+|||+++||++++++.++|++||||+|+
T Consensus 93 ~l~~~l~~le----~~~ll~~~~D~~nailEIrAGaGG~EA~dwA~~L~RMY~r~Ae~~g~k~eii~~~~~e~~Gik~~~ 168 (365)
T 2ihr_1 93 EAAKKLDELY----HQTLLNFPHAEKNAILTIQPGAGGTEACDWAEMLLRMYTRFAERQGFQVEVVDLTPGPEAGIDYAQ 168 (365)
T ss_dssp HHHHHHHHHH----HHHHTCSSSTTSEEEEEEEECSSTHHHHHHHHHHHHHHHHHHHTTTCEEEEEEEEECSSSSEEEEE
T ss_pred HHHHHHHHHH----HHHHCCCCCCCCCHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCEEEE
T ss_conf 4555799999----987146833125413288626860689999999999999999767984899874045688860699
Q ss_pred EEEECCCHHHHHHCCCCCEEEEEECCCCCCCCCCEEEEEEEEEECC-CCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCE
Q ss_conf 7775031112100024650267612545678511016888853033-433222454347999852888752000632121
Q gi|254780874|r 165 ATISGRGVFSRMKFESGVHRVQRVPATEASGRVHTSAATVAVLPEA-AEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSA 243 (357)
Q Consensus 165 ~~I~G~~aYg~Lk~E~GvHRvqRip~~es~gR~hTS~a~V~V~P~~-~~~~~~i~~~dl~i~~~rssG~GGQ~vN~t~sa 243 (357)
+.|+|++|||+||+|+|||||||||||+++||||||||+|+|+|++ +++++.|+|+||+|||||||||||||||||+||
T Consensus 169 ~~I~G~~ayg~lk~E~GvHRv~Rv~~~~~~~r~hts~~~v~v~P~~~~~~~~~i~~~dl~i~t~rssG~GGQ~vNkt~sA 248 (365)
T 2ihr_1 169 ILVKGENAYGLLSPEAGVHRLVRPSPFDASGRRHTSFAGVEVIPEVDEEVEVVLKPEELRIDVMRASGPGGQGVNTTDSA 248 (365)
T ss_dssp EEEESTTHHHHHGGGCEEEEEEEECTTSSSCCEEEEEEEEEEEEECCSSSSCCCCGGGEEEEEECCCCSSCCSGGGSCSE
T ss_pred EEEECCCHHHCCCCCCCEEEEEEECCCCCCCCEEEEEEEEEEECCCCCHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCE
T ss_conf 99965653320332163288986389789997244467899976776113200330111589886688987886651324
Q ss_pred EEEEECCCCEEE-EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCEEEEECC
Q ss_conf 588964984488-8436541358999999999999999999999999874465224674238221044899811243216
Q gi|254780874|r 244 VRITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRTYNFSQGRITDHRIN 322 (357)
Q Consensus 244 vri~H~ptgi~v-~~~eRsQ~~Nk~~A~~~L~~~l~~~~~~~~~~~~~~~r~~~~g~~~rs~~iRtY~~~~~rv~DhR~~ 322 (357)
|||||+||||+| ||+|||||+||++||++|++|||+++.++++++..+.| +|+|+++||+|||||||||+||||||||
T Consensus 249 Vri~H~ptgi~v~~q~ersq~~Nk~~A~~~L~~kl~~~~~~~~~~~~~~~~-~~~~~~~r~~~iRtY~fp~~rVtDhR~~ 327 (365)
T 2ihr_1 249 VRVVHLPTGITVTCQTTRSQIKNKELALKILKARLYELERKKREEELKALR-GEVRPIEWGSQIRSYVLDKNYVKDHRTG 327 (365)
T ss_dssp EEEEETTTTEEEEECSSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTT-CCSCCSCCCSCSEEEEGGGTEEEETTTC
T ss_pred EEEEECCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCEECCCCCCCCCCCC
T ss_conf 799973872255430121477659999999999999999999999999988-4747777658811525898834201649
Q ss_pred CEECCHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 4417877872886699999999999999987
Q gi|254780874|r 323 LTLYKLEYVLQGYIDDIINPLLTAHQAKMIG 353 (357)
Q Consensus 323 ~~~~~~~~~l~G~l~~~i~~~~~~~~~~~l~ 353 (357)
++++|+++||+|+||+||++++.|..+++..
T Consensus 328 ~~~~~~~~vl~G~ld~~i~a~l~~~~~~~~~ 358 (365)
T 2ihr_1 328 LMRHDPENVLDGDLMDLIWAGLEWKAGRRQG 358 (365)
T ss_dssp CEESCHHHHTTTCCHHHHHHHHHHHHTTC--
T ss_pred CEECCHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 8557868876887099999999999999873