PSIBLAST alignment of GI: 254780874 and protein with PDB id: 1gqe

>gi|20663625|pdb|1GQE|A Chain A, Polypeptide Chain Release Factor 2 (Rf2) From Escherichia Coli Length = 365
 Score =  235 bits (600), Expect = 7e-60,   Method: Composition-based stats.
 Identities = 107/344 (31%), Positives = 175/344 (50%), Gaps = 15/344 (4%)

Query: 10  CDLKNRFAEIELRMSESPSVD---AYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
              K R  E+   + +    +       L +E +++  ++  +    Q  ++   L  + 
Sbjct: 28  DAKKERLEEVNAELEQPDVWNEPERAQALGKERSSLEAVVDTLDQXKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + +    +       A    + E   ++ +        D   C L+I+AG+GG+EA 
Sbjct: 88  VEADDEETFNEAV-----AELDALEEKLAQLEFRRXFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L R Y R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASXLERXYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPE-AAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE   +ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERS--ANRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +A K  +A+LY+VE ++   E+    + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAXKQXKAKLYEVEXQKKNAEKQAXEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363