RPSBLAST alignment of GI: 254780874 and protein with PDBid: 1gqe

>1gqe_A Release factor 2, RF2; protein synthesis, ribosome, macromolecular mimicry, translation; 1.81A {Escherichia coli} SCOP: e.38.1.1 PDB: 1mi6_A 1ml5_Z* Length = 365

 Score =  323 bits (829), Expect = 4e-89
 Identities = 118/344 (34%), Positives = 190/344 (55%), Gaps = 17/344 (4%)

Query: 11  DLKNRFAEIELRMSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
             K R  E+   + + P V    +    L +E +++  ++  +    Q  ++   L  + 
Sbjct: 29  AKKERLEEVNAELEQ-PDVWNEPERAQALGKERSSLEAVVDTLDQMKQGLEDVSGLLELA 87

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            + + D E  + A  E+ A+E+++ +LE    +  +     D   C L+I+AG+GG+EA 
Sbjct: 88  VEAD-DEETFNEAVAELDALEEKLAQLE----FRRMFSGEYDSADCYLDIQAGSGGTEAQ 142

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
            +   L RMY R+A  R +K E++  S+ +  G K +   ISG   +  ++ E+GVHR+ 
Sbjct: 143 DWASMLERMYLRWAESRGFKTEIIEESEGEVAGIKSVTIKISGDYAYGWLRTETGVHRLV 202

Query: 187 RVPATEASGRVHTSAATVAVLPEAAE-IDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           R    ++ GR HTS ++  V PE  + ID++I   D+RID  RASG+GGQHVN T+SAVR
Sbjct: 203 RKSPFDSGGRRHTSFSSAFVYPEVDDDIDIEINPADLRIDVYRASGAGGQHVNRTESAVR 262

Query: 246 ITHIPTGIMVT-SSEKSQHQNRLRAMKVLRARLYDVERKRMANERSA--NRKLQIGSGDR 302
           ITHIPTGI+    +++SQH+N+ +AMK ++A+LY+VE ++   E+ A  + K  IG G  
Sbjct: 263 ITHIPTGIVTQCQNDRSQHKNKDQAMKQMKAKLYEVEMQKKNAEKQAMEDNKSDIGWG-- 320

Query: 303 SERIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTA 346
             +IR+Y     RI D R  +     + VL G +D  I   L A
Sbjct: 321 -SQIRSYVLDDSRIKDLRTGVETRNTQAVLDGSLDQFIEASLKA 363