RPSBLAST alignment of GI: 254780874 and protein with PDBid: 1zbt

>1zbt_A RF-1, peptide chain release factor 1; peptide chain release factor 1 (RF-1), structural genomics, joint center for structural genomics, JCSG; 2.34A {Streptococcus mutans} Length = 371

 Score =  257 bits (657), Expect = 3e-69
 Identities = 157/352 (44%), Positives = 230/352 (65%), Gaps = 6/352 (1%)

Query: 11  DLKNRFAEIELRMSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            +++R+ E+   +S  P V      +++L+ E A     ++    Y Q  Q   D   +I
Sbjct: 21  AVEDRYEELGELLS-DPDVVSDTKRFMELSREEANSRETVAVYREYKQVVQNIADAQEMI 79

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
            D + D E+ ++A+ E+   +    E E ++ +LLLPKD +DDK+ ILEIR   GG EAA
Sbjct: 80  KDASGDPELEEMAKEELKNSKVAKEEYEEKLRFLLLPKDPNDDKNIILEIRGAAGGDEAA 139

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF GDL  MY++YA  + WK EV+ +S N  GG KE+VA +SG+ V+S++K+ESG HRVQ
Sbjct: 140 LFAGDLLNMYQKYAENQGWKFEVMEASANGVGGLKEVVAMVSGQSVYSKLKYESGAHRVQ 199

Query: 187 RVPATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRI 246
           RVP TE+ GRVHTS ATV V+PE  E++ +I  +D+R+D   ASG+GGQ+VN   +AVRI
Sbjct: 200 RVPVTESQGRVHTSTATVLVMPEVEEVEYEIDPKDLRVDIYHASGAGGQNVNKVATAVRI 259

Query: 247 THIPTGIMV-TSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSER 305
            H+PT I V    E++Q +NR +AMK++RAR+ D   +   +E+ A RK  +G+GDRSER
Sbjct: 260 IHLPTNIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSER 319

Query: 306 IRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           IRTYNF Q R+TDHRI LTL KL+ +L G +D++I+ L+   Q + +   ++
Sbjct: 320 IRTYNFPQNRVTDHRIGLTLQKLDSILSGKLDEVIDALILYDQTQKLEELNK 371