RPSBLAST alignment of GI: 254780874 and protein with PDBid: 2b3t

>2b3t_B RF-1, peptide chain release factor 1; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: e.38.1.1 Length = 360

 Score =  237 bits (606), Expect = 3e-63
 Identities = 159/353 (45%), Positives = 234/353 (66%), Gaps = 11/353 (3%)

Query: 11  DLKNRFAEIELRMSESPSV----DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVI 66
            L  R  E++  +          + +  L+ EYA +S +    + + Q +++ +    ++
Sbjct: 11  ALHERHEEVQALLG-DAQTIADQERFRALSREYAQLSDVSRCFTDWQQVQEDIETAQMML 69

Query: 67  GDHNSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAA 126
                D E+R++AQ E+   +++  +LE ++  LLLPKD DD+++  LE+RAGTGG EAA
Sbjct: 70  ----DDPEMREMAQDELREAKEKSEQLEQQLQVLLLPKDPDDERNAFLEVRAGTGGDEAA 125

Query: 127 LFVGDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQ 186
           LF GDLFRMY RYA  R+W+VE++S+S+ + GGYKEI+A ISG GV+ R+KFESG HRVQ
Sbjct: 126 LFAGDLFRMYSRYAEARRWRVEIMSASEGEHGGYKEIIAKISGDGVYGRLKFESGGHRVQ 185

Query: 187 RVPATEASG-RVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVR 245
           RVPATE+ G    ++     +         D+   D+RIDT R+SG+GGQHVNTTDSA+R
Sbjct: 186 RVPATESQGRIHTSACTVAVMPELPDAELPDVNPADLRIDTFRSSGAGGQHVNTTDSAIR 245

Query: 246 ITHIPTGI-MVTSSEKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSE 304
           ITH+PTGI +    E+SQH+N+ +A+ VL AR++  E  +     ++ R+  +GSGDRS+
Sbjct: 246 ITHLPTGIVVECQDERSQHKNKAKALSVLGARIHAAEMAKRQQAEASTRRNLLGSGDRSD 305

Query: 305 RIRTYNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMIGSASE 357
           R RTYNF QGR+TDHRINLTLY+L+ V++G +D +I P++  HQA  + + SE
Sbjct: 306 RNRTYNFPQGRVTDHRINLTLYRLDEVMEGKLDMLIEPIIQEHQADQLAALSE 358