RPSBLAST alignment of GI: 254780874 and SCOP domain: d1rq0a_

Alignment
>d1rq0a_ e.38.1.1 (A:) Peptide chain release factor 1, RF1 {Thermotoga maritima [TaxId: 2336]} Length = 333
 Score =  227 bits (579), Expect = 1e-60
 Identities = 152/344 (44%), Positives = 219/344 (63%), Gaps = 18/344 (5%)

Query: 12  LKNRFAEIELRMSESPSV--DAYIKLTEEYAAISPIISKISIYDQKKQEEQDLHTVIGDH 69
           +K +  EIE  ++  P +  +       EYA I  I +   I ++ K+ ++ +  +  + 
Sbjct: 1   MKEKKKEIEKLLA-RPDLTPEQMKNYGMEYAKIEEIEN---ITNRIKETQEFIELLREEG 56

Query: 70  NSDSEIRDLAQIEVLAIEKEIRELENEINYLLLPKDTDDDKSCILEIRAGTGGSEAALFV 129
            ++ EI           EKE+ +L  E+         +     I+EIR GTGG EAALF 
Sbjct: 57  ENELEIEKY--------EKELDQLYQELL---FLLSPEASDKAIVEIRPGTGGEEAALFA 105

Query: 130 GDLFRMYERYAALRKWKVEVLSSSDNDDGGYKEIVATISGRGVFSRMKFESGVHRVQRVP 189
            DLFRMY RYA  + W +EV    + D GG +E+V  + G+  +  +K+ESGVHRVQRVP
Sbjct: 106 RDLFRMYTRYAERKGWNLEVAEIHETDLGGIREVVFFVKGKNAYGILKYESGVHRVQRVP 165

Query: 190 ATEASGRVHTSAATVAVLPEAAEIDVDIPLEDIRIDTMRASGSGGQHVNTTDSAVRITHI 249
            TE+ GR+HTS ATVAVLPE  E D++I  ED++I+T RASG GGQ+VN T+SAVRITH+
Sbjct: 166 VTESGGRIHTSTATVAVLPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHL 225

Query: 250 PTGIMVTSS-EKSQHQNRLRAMKVLRARLYDVERKRMANERSANRKLQIGSGDRSERIRT 308
           PTGI+V+   E+SQ+QN+  A+++LRARLY +++++   E S  RK QIG+G+RSE+IRT
Sbjct: 226 PTGIVVSCQNERSQYQNKQTALRILRARLYQLQKEQKEREISQKRKSQIGTGERSEKIRT 285

Query: 309 YNFSQGRITDHRINLTLYKLEYVLQGYIDDIINPLLTAHQAKMI 352
           YNF Q R+TDHRIN T Y+L+ +L G +D+II+ L+       +
Sbjct: 286 YNFPQNRVTDHRINYTSYRLQEILDGDLDEIISKLIEHDIENNL 329

SCOP domain information

class: Multi-domain proteins (alpha and beta)
fold: Release factor
superfamily: Release factor
family: Release factor
domain: Peptide chain release factor 1, RF1
species: Thermotoga maritima [TaxId: 2336]