HHsearch alignment for GI: 254780875 and conserved domain: COG0116
>COG0116 Predicted N6-adenine-specific DNA methylase [DNA replication, recombination, and repair].
Probab=99.10 E-value=5.1e-11 Score=92.94 Aligned_cols=131 Identities=27% Similarity=0.281 Sum_probs=90.1
Q ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCC--------------------------------CC-
Q ss_conf 235655531012332110124686056642142112331222233--------------------------------32-
Q gi|254780875|r 76 PETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESP--------------------------------FF- 122 (264)
Q Consensus 76 peTE~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~--------------------------------~~- 122 (264)
T Consensus 174 pLketLAaAil~lagw----~~~~pl~DPmCGSGTi~IEAAl~~~niAPg~~R~~~f~~w~~~~~~lw~~~~~ea~~~a~ 249 (381)
T COG0116 174 PLKETLAAAILLLAGW----KPDEPLLDPMCGSGTILIEAALIAANIAPGLNRRFGFEFWDWFDKDLWDKLREEAEERAR 249 (381)
T ss_pred CCHHHHHHHHHHHCCC----CCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_conf 8569999999997399----999834168877347999999734456876332200455432138889999999999865
Q ss_pred ------CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf ------1001333222002444201100012222222222222221--00233320113332100122111112357543
Q gi|254780875|r 123 ------KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRI 194 (264)
Q Consensus 123 ------~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~~~--~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~ 194 (264)
T Consensus 250 ~~~~~~~~~G~Did~r~i~~Ak~NA~~AGv~d~I~f~~~d~~~l~~~~~~~gvvI~NPPYGeR-----lg~~-------- 316 (381)
T COG0116 250 RGKELPIIYGSDIDPRHIEGAKANARAAGVGDLIEFKQADATDLKEPLEEYGVVISNPPYGER-----LGSE-------- 316 (381)
T ss_pred HCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHCCCCCCCCCEEEECCCCHHH-----CCCH--------
T ss_conf 147666589874898999999998997698832899974432166876669989958983011-----1770--------
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC
Q ss_conf 32101123210256899999853788789998176
Q gi|254780875|r 195 SLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY 229 (264)
Q Consensus 195 AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~ 229 (264)
T Consensus 317 ~~v~-----~LY~~fg~~lk~~~~~ws~~v~-tt~ 345 (381)
T COG0116 317 ALVA-----KLYREFGRTLKRLLAGWSRYVF-TTS 345 (381)
T ss_pred HHHH-----HHHHHHHHHHHHHHCCCCEEEE-ECC
T ss_conf 4699-----9999999999987257736999-766