HHsearch alignment for GI: 254780875 and conserved domain: COG2226

Probab=99.34  E-value=3.4e-12  Score=100.71  Aligned_cols=106  Identities=25%  Similarity=0.329  Sum_probs=85.8

Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC--CCCCHHHHHHHCCH
Q ss_conf             4686056642142112331222233321001333222002444201100012222222222222--22100233320113
Q gi|254780875|r   96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS--SVEGLFDVIVSNPP  173 (264)
Q Consensus        96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~--~~~~~fD~IvsNPP  173 (264)
T Consensus        50 ~~g~~vLDva~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~dAe~LPf~D~sFD~vt~~--  126 (238)
T COG2226          50 KPGDKVLDVACGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVGDAENLPFPDNSFDAVTIS--  126 (238)
T ss_pred             CCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHCCCCCC-EEEEEECHHHCCCCCCCCCEEEEE--
T ss_conf             99987999668731999999996588449999799999999998743247663-279970565498888765889865--


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEE-EEEC
Q ss_conf             332100122111112357543321011232102568999998537887899-9817
Q gi|254780875|r  174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCS-VEIG  228 (264)
Q Consensus       174 YI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~-lEig  228 (264)
T Consensus       127 -----------fglrnv-------------~d~~~aL~E~~RVlKpgG~~~vle~~  158 (238)
T COG2226         127 -----------FGLRNV-------------TDIDKALKEMYRVLKPGGRLLVLEFS  158 (238)
T ss_pred             -----------EHHHCC-------------CCHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf             -----------123527-------------87899999998762687499998768