HHsearch alignment for GI: 254780875 and conserved domain: COG2227
>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism].
Probab=99.33 E-value=5.3e-13 Score=105.99 Aligned_cols=100 Identities=27% Similarity=0.368 Sum_probs=81.6
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC--CHHHHHHHCCH
Q ss_conf 4686056642142112331222233321001333222002444201100012222222222222221--00233320113
Q gi|254780875|r 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE--GLFDVIVSNPP 173 (264)
Q Consensus 96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~~~--~~fD~IvsNPP 173 (264)
T Consensus 58 l~g~~vLDvGCGgG~Lse~mAr~--Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cm-- 131 (243)
T COG2227 58 LPGLRVLDVGCGGGILSEPLARL--GASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCM-- 131 (243)
T ss_pred CCCCEEEEECCCCCHHHHHHHHC--CCEEEEECCCHHHHHHHHHHHHHCCCC--CCCHHHHHHHHHHCCCCCCEEEEH--
T ss_conf 77770887458832864999977--994697438767789998754424632--252233299997248974489773--
Q ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE
Q ss_conf 3321001221111123575433210112321025689999985378878999
Q gi|254780875|r 174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV 225 (264)
Q Consensus 174 YI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~l 225 (264)
T Consensus 132 ------------EVlEHv~------------dp~~~~~~c~~lvkP~G~lf~ 159 (243)
T COG2227 132 ------------EVLEHVP------------DPESFLRACAKLVKPGGILFL 159 (243)
T ss_pred ------------HHHHCCC------------CHHHHHHHHHHHCCCCCEEEE
T ss_conf ------------5877169------------999999999986299928999