HHsearch alignment for GI: 254780875 and conserved domain: COG2264
>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis].
Probab=99.71 E-value=1.9e-17 Score=135.22 Aligned_cols=127 Identities=31% Similarity=0.352 Sum_probs=100.0
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCC-CHHHHHHHCCHH
Q ss_conf 4686056642142112331222233321001333222002444201100012222222222222221-002333201133
Q gi|254780875|r 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSVE-GLFDVIVSNPPY 174 (264)
Q Consensus 96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~~~-~~fD~IvsNPPY 174 (264)
T Consensus 161 ~~g~~vlDvGcGSGILaIAa~kL-GA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVAN--- 236 (300)
T COG2264 161 KKGKTVLDVGCGSGILAIAAAKL-GAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGFLLLEVPENGPFDVIVAN--- 236 (300)
T ss_pred CCCCEEEEECCCHHHHHHHHHHC-CCCEEEEECCCHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHCCCCCCCEEEEH---
T ss_conf 58987998267815999999981-98668997188899999999999769960220034563000136865689860---
Q ss_pred HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEE-EECCCHHHHHHHHHHHCCCCEEEEEEC
Q ss_conf 321001221111123575433210112321025689999985378878999-817667999999999789805899805
Q gi|254780875|r 175 IESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSV-EIGYNQKVDVVRIFESRKLFLVNAFKD 252 (264)
Q Consensus 175 I~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~l-Eig~~q~~~v~~ll~~~gf~~v~~~kD 252 (264)
T Consensus 237 ILA--------------------------~vl~~La~~~~~~lkpgg~lIlSGIl~~q~~~V~~a~~~~gf~v~~~~~~ 289 (300)
T COG2264 237 ILA--------------------------EVLVELAPDIKRLLKPGGRLILSGILEDQAESVAEAYEQAGFEVVEVLER 289 (300)
T ss_pred HHH--------------------------HHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCCEEEEEEEC
T ss_conf 527--------------------------89999999999870889369998620758999999998589768689700