HHsearch alignment for GI: 254780875 and conserved domain: COG2890
>COG2890 HemK Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis].
Probab=100.00 E-value=0 Score=445.29 Aligned_cols=256 Identities=38% Similarity=0.550 Sum_probs=239.2
Q ss_pred CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCEEEEEEEEEEECCCCCHHHHHHHH
Q ss_conf 75689999999983899989850448858989999999999989749837685363144237677504620512235655
Q gi|254780875|r 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSDTFEPRPETELL 81 (264)
Q Consensus 2 ~a~~dA~~Ll~~~l~~~~~~l~~~~~~~l~~~~~~~l~~~i~rr~~g~Pl~YIlg~~~F~~~~f~v~~~vLIPRpeTE~l 81 (264)
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rr~~~~P~~yi~g~~~f~gl~~~v~~~vliPr~dTe~L 99 (280)
T COG2890 20 TPNLDAELLLLHLLGKPRDQLLAHPEAELSEEELERLRELLERRAEGEPVAYILGSAEFGGLRFKVDEGVLIPRPDTELL 99 (280)
T ss_pred CCCCCHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHCCCCEEECCEEEECCCCCCCCCCHHHH
T ss_conf 87434999998872688777764543447867899999999999769987681023656163453479866889767999
Q ss_pred HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 53101233211012468605664214211233122223332100133322200244420110001222222222222222
Q gi|254780875|r 82 VDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSSV 161 (264)
Q Consensus 82 v~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~~ 161 (264)
T Consensus 100 ve~~l~~~----~~~~~-~ilDlGTGSG~iai~la~~~~~~~V~a~Dis~~Al~~A~~Na~~~~l-~~~~~~~~dlf~~~ 173 (280)
T COG2890 100 VEAALALL----LQLDK-RILDLGTGSGAIAIALAKEGPDAEVIAVDISPDALALARENAERNGL-VRVLVVQSDLFEPL 173 (280)
T ss_pred HHHHHHHH----HCCCC-CEEEECCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCC-CCEEEEECCHHHCC
T ss_conf 99999751----11589-18996588319999999618988799998999999999999998289-74798740033346
Q ss_pred CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHH
Q ss_conf 10023332011333210012211111235754332101123210256899999853788789998176679999999997
Q gi|254780875|r 162 EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFES 241 (264)
Q Consensus 162 ~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~~~v~~ll~~ 241 (264)
T Consensus 174 ~~~fDlIVsNPPYip~~-~~~~~~~~~~~EP~~Al~~g~dGl~~~~~i~~~a~~~l~~~g~l~le~g~~q~~~v~~~~~~ 252 (280)
T COG2890 174 RGKFDLIVSNPPYIPAE-DPELLPEVVRYEPLLALVGGGDGLEVYRRILGEAPDILKPGGVLILEIGLTQGEAVKALFED 252 (280)
T ss_pred CCCCCEEEECCCCCCCC-CCCCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHH
T ss_conf 88857799689988885-21137421358979987248777899999999899872868289999769848999999997
Q ss_pred CC-CCEEEEEECCCCCCEEEEEEC
Q ss_conf 89-805899805689975999979
Q gi|254780875|r 242 RK-LFLVNAFKDYGGNDRVLLFCR 264 (264)
Q Consensus 242 ~g-f~~v~~~kD~~g~~R~vi~~r 264 (264)
T Consensus 253 ~~~~~~v~~~~d~~g~~rv~~~~~ 276 (280)
T COG2890 253 TGFFEIVETLKDLFGRDRVVLAKL 276 (280)
T ss_pred CCCCEEEEEEECCCCCEEEEEEEE
T ss_conf 498447665514567635888760