HHsearch alignment for GI: 254780875 and conserved domain: COG4106
>COG4106 Tam Trans-aconitate methyltransferase [General function prediction only].
Probab=98.93 E-value=1.3e-09 Score=83.74 Aligned_cols=120 Identities=21% Similarity=0.225 Sum_probs=87.1
Q ss_pred HHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCC
Q ss_conf 12235655531012332110124686056642142112331222233321001333222002444201100012222222
Q gi|254780875|r 74 PRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTL 153 (264)
Q Consensus 74 PRpeTE~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~ 153 (264)
T Consensus 16 tRPa~dLla~V---------p~~~~~~v~DLGCGpGnsTelL~~RwP~A~i~GiDsS~~Mla~Aa~r-----l-p~~~f~ 80 (257)
T COG4106 16 TRPARDLLARV---------PLERPRRVVDLGCGPGNSTELLARRWPDAVITGIDSSPAMLAKAAQR-----L-PDATFE 80 (257)
T ss_pred CCCHHHHHHHC---------CCCCCCEEEECCCCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHH-----C-CCCCEE
T ss_conf 57388998647---------86664103455778877889999868888676046999999999974-----8-997321
Q ss_pred CCCCCCCCC-CHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHH
Q ss_conf 222222221-0023332011333210012211111235754332101123210256899999853788789998176679
Q gi|254780875|r 154 QSDWFSSVE-GLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQK 232 (264)
Q Consensus 154 ~~d~~~~~~-~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~ 232 (264)
T Consensus 81 ~aDl~~w~p~~~~dllfaN------AvlqWlpdH--------------------~~ll~rL~~~L~Pgg~LAVQmPdN~d 134 (257)
T COG4106 81 EADLRTWKPEQPTDLLFAN------AVLQWLPDH--------------------PELLPRLVSQLAPGGVLAVQMPDNLD 134 (257)
T ss_pred CCCHHHCCCCCCCCHHHHH------HHHHHCCCC--------------------HHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 0527544998763303344------366443640--------------------89999999850888569997887647
Q ss_pred HH
Q ss_conf 99
Q gi|254780875|r 233 VD 234 (264)
Q Consensus 233 ~~ 234 (264)
T Consensus 135 ep 136 (257)
T COG4106 135 EP 136 (257)
T ss_pred CH
T ss_conf 64