HHsearch alignment for GI: 254780875 and conserved domain: COG4976
>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only].
Probab=98.66 E-value=3.6e-08 Score=74.21 Aligned_cols=122 Identities=25% Similarity=0.350 Sum_probs=81.9
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC---CCC-CCCCHHHHHH
Q ss_conf 124686056642142112331222233321001333222002444201100012222222222---222-2210023332
Q gi|254780875|r 94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFS-SVEGLFDVIV 169 (264)
Q Consensus 94 ~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d---~~~-~~~~~fD~Iv 169 (264)
T Consensus 122 ~~g~F~~~lDLGCGTGL~G~~lR~~--a~~ltGvDiS~nMl~kA~eKg----~YD~L--~~Aea~~Fl~~~~~er~DLi~ 193 (287)
T COG4976 122 DLGPFRRMLDLGCGTGLTGEALRDM--ADRLTGVDISENMLAKAHEKG----LYDTL--YVAEAVLFLEDLTQERFDLIV 193 (287)
T ss_pred CCCCCCEEEECCCCCCCCCHHHHHH--HHHCCCCCHHHHHHHHHHHCC----CHHHH--HHHHHHHHHHHCCCCCCCCHH
T ss_conf 5776202344266767662767888--865127762699999988624----15788--898999875522677643012
Q ss_pred HC--CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE-----------CCCH----H
Q ss_conf 01--13332100122111112357543321011232102568999998537887899981-----------7667----9
Q gi|254780875|r 170 SN--PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-----------GYNQ----K 232 (264)
Q Consensus 170 sN--PPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEi-----------g~~q----~ 232 (264)
T Consensus 194 AaDVl~YlG----------------------------~Le~~~~~aa~~L~~gGlfaFSvE~l~~~~~f~l~ps~RyAH~ 245 (287)
T COG4976 194 AADVLPYLG----------------------------ALEGLFAGAAGLLAPGGLFAFSVETLPDDGGFVLGPSQRYAHS 245 (287)
T ss_pred HHHHHHHHC----------------------------CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCHHHHHCCC
T ss_conf 456788640----------------------------0346899999855898648987231677787321646532252
Q ss_pred -HHHHHHHHHCCCCEEEEEE
Q ss_conf -9999999978980589980
Q gi|254780875|r 233 -VDVVRIFESRKLFLVNAFK 251 (264)
Q Consensus 233 -~~v~~ll~~~gf~~v~~~k 251 (264)
T Consensus 246 ~~YVr~~l~~~Gl~~i~~~~ 265 (287)
T COG4976 246 ESYVRALLAASGLEVIAIED 265 (287)
T ss_pred HHHHHHHHHHCCCEEEEEEC
T ss_conf 28999999745962787424