HHsearch alignment for GI: 254780875 and conserved domain: COG4976

>COG4976 Predicted methyltransferase (contains TPR repeat) [General function prediction only].
Probab=98.66  E-value=3.6e-08  Score=74.21  Aligned_cols=122  Identities=25%  Similarity=0.350  Sum_probs=81.9

Q ss_pred             CCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCC---CCC-CCCCHHHHHH
Q ss_conf             124686056642142112331222233321001333222002444201100012222222222---222-2210023332
Q gi|254780875|r   94 EKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSD---WFS-SVEGLFDVIV  169 (264)
Q Consensus        94 ~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d---~~~-~~~~~fD~Iv  169 (264)
T Consensus       122 ~~g~F~~~lDLGCGTGL~G~~lR~~--a~~ltGvDiS~nMl~kA~eKg----~YD~L--~~Aea~~Fl~~~~~er~DLi~  193 (287)
T COG4976         122 DLGPFRRMLDLGCGTGLTGEALRDM--ADRLTGVDISENMLAKAHEKG----LYDTL--YVAEAVLFLEDLTQERFDLIV  193 (287)
T ss_pred             CCCCCCEEEECCCCCCCCCHHHHHH--HHHCCCCCHHHHHHHHHHHCC----CHHHH--HHHHHHHHHHHCCCCCCCCHH
T ss_conf             5776202344266767662767888--865127762699999988624----15788--898999875522677643012


Q ss_pred             HC--CHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE-----------CCCH----H
Q ss_conf             01--13332100122111112357543321011232102568999998537887899981-----------7667----9
Q gi|254780875|r  170 SN--PPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI-----------GYNQ----K  232 (264)
Q Consensus       170 sN--PPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEi-----------g~~q----~  232 (264)
T Consensus       194 AaDVl~YlG----------------------------~Le~~~~~aa~~L~~gGlfaFSvE~l~~~~~f~l~ps~RyAH~  245 (287)
T COG4976         194 AADVLPYLG----------------------------ALEGLFAGAAGLLAPGGLFAFSVETLPDDGGFVLGPSQRYAHS  245 (287)
T ss_pred             HHHHHHHHC----------------------------CHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEECCHHHHHCCC
T ss_conf             456788640----------------------------0346899999855898648987231677787321646532252


Q ss_pred             -HHHHHHHHHCCCCEEEEEE
Q ss_conf             -9999999978980589980
Q gi|254780875|r  233 -VDVVRIFESRKLFLVNAFK  251 (264)
Q Consensus       233 -~~v~~ll~~~gf~~v~~~k  251 (264)
T Consensus       246 ~~YVr~~l~~~Gl~~i~~~~  265 (287)
T COG4976         246 ESYVRALLAASGLEVIAIED  265 (287)
T ss_pred             HHHHHHHHHHCCCEEEEEEC
T ss_conf             28999999745962787424