HHsearch alignment for GI: 254780875 and conserved domain: PRK00811

>PRK00811 spermidine synthase; Provisional.
Probab=98.10  E-value=7e-06  Score=59.16  Aligned_cols=189  Identities=17%  Similarity=0.239  Sum_probs=118.3

Q ss_pred             CCCHHHH-CCCEEEEEEEEEEECCCCCHHHH----HHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             9837685-36314423767750462051223----565553101233211012468605664214211233122223332
Q gi|254780875|r   48 HESIHRI-LGWRDFYNVRLTLSSDTFEPRPE----TELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFF  122 (264)
Q Consensus        48 g~Pl~YI-lg~~~F~~~~f~v~~~vLIPRpe----TE~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~  122 (264)
T Consensus        30 ~S~yQ~i~i~~s~~~G~~l~LDg~~q~se~DE~~YhE~lvH~pl~------~h~~pk~VLIiGGGDGg~~rE~lkh~~v~  103 (283)
T PRK00811         30 KSPFQKIEIFETPEFGRLLALDGCVMTTERDEFIYHEMMTHVPLL------AHPNPKKVLIIGGGDGGTLREVLKHPSVE  103 (283)
T ss_pred             CCCCCEEEEEECCCCCEEEEECCEEEECCCCHHHHHHHHHHHHHH------HCCCCCEEEEECCCCHHHHHHHHCCCCCC
T ss_conf             579847999986774239999998544038577776775404777------38997748995687479999984278856


Q ss_pred             CCCCCCCCCCCHHHHHHCCCCC--C-C-CCCCCCCCCCCCCCC---CCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCC
Q ss_conf             1001333222002444201100--0-1-222222222222222---1002333201133321001221111123575433
Q gi|254780875|r  123 KGVGVDISCKALEIAKSNAVTN--G-V-SERFDTLQSDWFSSV---EGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRIS  195 (264)
Q Consensus       123 ~v~~~Dis~~al~~A~~N~~~~--~-~-~~~i~~~~~d~~~~~---~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~A  195 (264)
T Consensus       104 ~v~~VeiD~~Vi~~~~~~lp~~~~~~~~dprv~~~~~Dg~~fv~~~~~~yDvII~D~-----tD-----P~----gpa~~  169 (283)
T PRK00811        104 KITMVEIDERVVEMSRKYLPEISGGAWDDPRVELVIGDGVKFVRETENSFDVIIVDS-----TD-----PV----GPAEG  169 (283)
T ss_pred             EEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHCCCCCCEEEEEC-----CC-----CC----CHHHH
T ss_conf             799994689999999998388631330297159982789999984523554899808-----99-----88----64455


Q ss_pred             CCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECC--CHHHHHHHHHHH--CCCCEEEEEE----CC-CCCCEEEEEEC
Q ss_conf             2101123210256899999853788789998176--679999999997--8980589980----56-89975999979
Q gi|254780875|r  196 LDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGY--NQKVDVVRIFES--RKLFLVNAFK----DY-GGNDRVLLFCR  264 (264)
Q Consensus       196 L~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~--~q~~~v~~ll~~--~gf~~v~~~k----D~-~g~~R~vi~~r  264 (264)
T Consensus       170 Lf--------t~~Fy~~~~~~L~~~Gi~v~Q~~sp~~~~~~~~~~~~~l~~~F~~v~~y~~~vPty~~g~wgf~~aSk  239 (283)
T PRK00811        170 LF--------TKEFYENCKRALKEGGIFVAQSESPFLQADEIKDLHKKLREVFPIVRPYQAAVPTYPSGIWSFTFASK  239 (283)
T ss_pred             HC--------CHHHHHHHHHHCCCCCEEEECCCCHHHCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHEEEEEEC
T ss_conf             34--------59999999985399958999279832069999999999998688668999955568986231167737