HHsearch alignment for GI: 254780875 and conserved domain: PRK04338

>PRK04338 N(2),N(2)-dimethylguanosine tRNA methyltransferase; Provisional.

Probab=97.89  E-value=7.4e-06  Score=59.00  Aligned_cols=82  Identities=26%  Similarity=0.317  Sum_probs=64.4

Q ss_pred             CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCCHHHHHHHCC
Q ss_conf             46860566421421123312222333210013332220024442011000122222222222222---210023332011
Q gi|254780875|r   96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIVSNP  172 (264)
Q Consensus        96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~---~~~~fD~IvsNP  172 (264)
T Consensus        50 ~~~~~ilDalsasGiR~iRy~~E~~~~~v~~NDi~~~a~~~i~~N~~~N~~~-~~~v~~~dAn~lm~~~~~~fD~IDlDP  128 (376)
T PRK04338         50 KRRKSVLDALSASGIRGIRYALETGVEKVILNDINPDAVELIKKNLELNGLE-NAEVFNEDANVLLHENERKFDVVDIDP  128 (376)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHHHCCC-CEEEECCCHHHHHHHCCCCCCEEEECC
T ss_conf             0697687406765499999987279987999569999999999999982998-269813248999983787587786789


Q ss_pred             -----HHHHHH
Q ss_conf             -----333210
Q gi|254780875|r  173 -----PYIESV  178 (264)
Q Consensus       173 -----PYI~~~  178 (264)
T Consensus       129 fGSp~pflDsA  139 (376)
T PRK04338        129 FGSPAPFLDSA  139 (376)
T ss_pred             CCCCCHHHHHH
T ss_conf             99920879999