HHsearch alignment for GI: 254780875 and conserved domain: PRK05785
>PRK05785 hypothetical protein; Provisional.
Probab=98.47 E-value=8.1e-07 Score=65.30 Aligned_cols=153 Identities=16% Similarity=0.153 Sum_probs=79.0
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCC--CCCCCCHHHHHHH---
Q ss_conf 46860566421421123312222333210013332220024442011000122222222222--2222100233320---
Q gi|254780875|r 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDW--FSSVEGLFDVIVS--- 170 (264)
Q Consensus 96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~--~~~~~~~fD~Ivs--- 170 (264)
T Consensus 50 ~~~~~vLDva~GTGd~a~~l~~~---~~v~~~D~s~~ML~~a~~~~~~---------v~~~ae~LPf~d~sFD~vt~~Fg 117 (225)
T PRK05785 50 KSPLKVLDAGAGPGNMAYHLRKI---RYVVALDYTEEMLRLNLVADDK---------VVGSFEAMPFRDKSFDLVMSGYA 117 (225)
T ss_pred CCCCEEEEECCCCHHHHHHHHCC---CEEEEEECCHHHHHHHHHCCCC---------EEEHHHHCCCCCCCEEEEEEEEE
T ss_conf 88882899568843999996347---8699998899999987643211---------37318539999882527763443
Q ss_pred --CCHHHHHH--CCCCCCCC--CCC-CCCCCCCCCCCCCCCCH-HHHHHHHHHHCCCCC----EEEE-E--ECCCHHHHH
Q ss_conf --11333210--01221111--123-57543321011232102-568999998537887----8999-8--176679999
Q gi|254780875|r 171 --NPPYIESV--IVDCLGLE--VRD-FDPRISLDGGIDGLSHY-RTIADGVSRHLNKDG----LCSV-E--IGYNQKVDV 235 (264)
Q Consensus 171 --NPPYI~~~--~~~~l~~~--v~~-~EP~~AL~gg~dGl~~~-~~ii~~~~~~L~~~G----~l~l-E--ig~~q~~~v 235 (264)
T Consensus 118 lRN~~d~~~al~E~~RVlk~~~iLe~s~P~~~~~r~--~y~~Y~~~ilP~ig~l~~~~~~a~~Y~YL~~SI~~fP~~~~l 195 (225)
T PRK05785 118 LHASDDIEKAVAEFSRVSRYQVVVAIGKPDNVVARK--LLSFYLKYILPYLACLVGPKEVCREYKKIYYIYKRLPTNSQL 195 (225)
T ss_pred EECCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHH--HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCHHHH
T ss_conf 004888999999999730977999968998478999--999999656898628870999875241799999987999999
Q ss_pred HHHHHHCCCCEEEEEECCC-CCCEEEEEEC
Q ss_conf 9999978980589980568-9975999979
Q gi|254780875|r 236 VRIFESRKLFLVNAFKDYG-GNDRVLLFCR 264 (264)
Q Consensus 236 ~~ll~~~gf~~v~~~kD~~-g~~R~vi~~r 264 (264)
T Consensus 196 ~~~l~~~~~~~--~~~~~~~Giv~i~~g~K 223 (225)
T PRK05785 196 RQIISRYADIK--VFEEKALGLVYFYVASS 223 (225)
T ss_pred HHHHHHHCCEE--EEECCCCCEEEEEEEEE
T ss_conf 99999848747--87506656799999980