HHsearch alignment for GI: 254780875 and conserved domain: TIGR00138
>TIGR00138 gidB methyltransferase GidB; InterPro: IPR003682 GidB (glucose-inhibited division protein B) appears to be present and in a single copy in all complete eubacterial genomes so far. Its mode of action is unknown, but a methytransferase fold is reported from the crystal structure. It may be a family of bacterial glucose inhibited division proteins that are involved in the regulation of cell division .; GO: 0007049 cell cycle.
Probab=98.18 E-value=3.1e-06 Score=61.51 Aligned_cols=134 Identities=18% Similarity=0.191 Sum_probs=95.3
Q ss_pred CCCEEEEECCCCCCCCCCC-CCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC---C-CCCHHHHHHHCC
Q ss_conf 8605664214211233122-2233321001333222002444201100012222222222222---2-210023332011
Q gi|254780875|r 98 VVRILDLGTGTGAVCLALL-KESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS---S-VEGLFDVIVSNP 172 (264)
Q Consensus 98 ~~~vLDlG~GsG~i~i~la-~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~---~-~~~~fD~IvsNP 172 (264)
T Consensus 50 ~~~~~DiGSG~GfPGipL~Ci~~p~~~~~Lles~~KK~~FL~~v~~~L~L~N-~~i~~~R~E~~g~~~~~~~~D~~~~-- 126 (197)
T TIGR00138 50 GKKVIDIGSGAGFPGIPLACILRPELKLTLLESNKKKVNFLKEVKKELGLNN-VEILNGRVEDLGSKQHEEQFDVITS-- 126 (197)
T ss_pred CCEEEEECCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHCCCC-CHHEEHHHHHCCCCCCCCCCCEEEE--
T ss_conf 3126773478971456534220576428984277406899999999838998-2420011255055453335787898--
Q ss_pred HHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH---HHHCCCCEEEE
Q ss_conf 333210012211111235754332101123210256899999853788789998176679999999---99789805899
Q gi|254780875|r 173 PYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI---FESRKLFLVNA 249 (264)
Q Consensus 173 PYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~~~v~~l---l~~~gf~~v~~ 249 (264)
T Consensus 127 ---------------------RAl-------~~l~~~~e~~~~L~~~~G~~~~~KG~~~~~E~~~~~~~~~~~~~~~l~~ 178 (197)
T TIGR00138 127 ---------------------RAL-------VSLNELLELTLPLLKVGGYFLAYKGKYLEDEIEEKKRKIQVLGVEVLKV 178 (197)
T ss_pred ---------------------CCC-------HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHCCHHHHHHHCCEEEEE
T ss_conf ---------------------031-------0246888866303788978999708665888760501255635600000
Q ss_pred ---EECCCCCCEEEEE
Q ss_conf ---8056899759999
Q gi|254780875|r 250 ---FKDYGGNDRVLLF 262 (264)
Q Consensus 250 ---~kD~~g~~R~vi~ 262 (264)
T Consensus 179 ~~~~~~~sg~~r~lv~ 194 (197)
T TIGR00138 179 PSLTANVSGFQRHLVI 194 (197)
T ss_pred CCCCCCCCCCCCCEEE
T ss_conf 0256787876300687