HHsearch alignment for GI: 254780875 and conserved domain: TIGR00536
>TIGR00536 hemK_fam methyltransferase, HemK family; InterPro: IPR004556 The gene hemK from Escherichia coli was found to contribute to heme biosynthesis and originally suggested to be protoporphyrinogen oxidase . Functional analysis of the nearest homolog in Saccharomyces cerevisiae, YNL063w, finds it is not protoporphyrinogen oxidase and sequence analysis suggests that HemK homologs have S-adenosyl-methionine-dependent methyltransferase activity . Homologs are found, usually in a single copy, in nearly all completed genomes, but varying somewhat in apparent domain architecture. Both Escherichia coli and Haemophilus influenzae have two members rather than one. The members from the Mycoplasmas have an additional C-terminal domain.; GO: 0008276 protein methyltransferase activity, 0006479 protein amino acid methylation.
Probab=100.00 E-value=2.4e-39 Score=279.36 Aligned_cols=262 Identities=30% Similarity=0.429 Sum_probs=236.9
Q ss_pred CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHH-HHHHHHHHHHHHCC-CCHHHHCCCEEEEEEEEEEECCCCCHHHHHH
Q ss_conf 756899999999838999898504488589899-99999999989749-8376853631442376775046205122356
Q gi|254780875|r 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQ-RFFLTNAIVRSLKH-ESIHRILGWRDFYNVRLTLSSDTFEPRPETE 79 (264)
Q Consensus 2 ~a~~dA~~Ll~~~l~~~~~~l~~~~~~~l~~~~-~~~l~~~i~rr~~g-~Pl~YIlg~~~F~~~~f~v~~~vLIPRpeTE 79 (264)
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 106 (311)
T TIGR00536 27 NPWLEALLLLELDLGLERDLLLAFLTEELTPDETKERLFELVLRRLEGRVPVAYLLGKKEFWGLEFFVNEGVLIPRPETE 106 (311)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCEECCCCCHH
T ss_conf 64113566654443334566665432014546789999999987641246256653001212510220475112576378
Q ss_pred HHHHHHCCCCCCC-CCCCCC-CCEEEEECCCCCCCCCCCCCCC--CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCC
Q ss_conf 5553101233211-012468-6056642142112331222233--32100133322200244420110001222222222
Q gi|254780875|r 80 LLVDSALAFSLPR-IEKRDV-VRILDLGTGTGAVCLALLKESP--FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQS 155 (264)
Q Consensus 80 ~lv~~~l~~~~~~-~~~~~~-~~vLDlG~GsG~i~i~la~~~~--~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~ 155 (264)
T Consensus 107 ~~~~~~~~~~~~~~~~~~~~p~~~~d~~~g~g~~~~~~~~~~~pc~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (311)
T TIGR00536 107 ELVEKVLLAALASLLSQPPLPLHILDLGTGSGCIALALAYEFPPCNAEVIAVDLSPDALALAEENAEKLGLEGRVELLQS 186 (311)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCCEEEHH
T ss_conf 99999999988754114776501110145631566655430466662266411223678888876776432012001011
Q ss_pred CCCCCCCC----HHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCC-CCCCCCCHHHHHHHHHHHCCCCCEEEEEECCC
Q ss_conf 22222210----02333201133321001221111123575433210-11232102568999998537887899981766
Q gi|254780875|r 156 DWFSSVEG----LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDG-GIDGLSHYRTIADGVSRHLNKDGLCSVEIGYN 230 (264)
Q Consensus 156 d~~~~~~~----~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~g-g~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~ 230 (264)
T Consensus 187 ~~~~~~~~~~~p~~~~~~~~ppy~~~~~~~~~~~~~~~~~p~~~l~~~g~~g~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 266 (311)
T TIGR00536 187 DLLEPLPGLGGPKLDLLVSNPPYIDEEDLADLSPGVVLFEPLLALVGFGDDGLKILKRILELAPDYLKPGGFLLLEIGNW 266 (311)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCH
T ss_conf 24443320366522366458865441345553112343200345430474007899999875454305675589961622
Q ss_pred HHHHHHHHHH-H-----CCCCEEEEEEC-CCCCCEEEEEE
Q ss_conf 7999999999-7-----89805899805-68997599997
Q gi|254780875|r 231 QKVDVVRIFE-S-----RKLFLVNAFKD-YGGNDRVLLFC 263 (264)
Q Consensus 231 q~~~v~~ll~-~-----~gf~~v~~~kD-~~g~~R~vi~~ 263 (264)
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (311)
T TIGR00536 267 QLGLLKELLRVPGDSYLFTWYDLELGRDGLSGKERVVLGL 306 (311)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHH
T ss_conf 3567787664202013332232221000001101232121