HHsearch alignment for GI: 254780875 and conserved domain: TIGR02081

>TIGR02081 metW methionine biosynthesis protein MetW; InterPro: IPR010743 This family consists of several bacterial and one archaeal methionine biosynthesis MetW proteins. Biosynthesis of methionine from homoserine in Pseudomonas putida takes place in three steps. The first step is the acylation of homoserine to yield an acyl-L-homoserine. This reaction is catalysed by the products of the metXW genes and is equivalent to the first step in enterobacteria, Gram-positive bacteria and fungi, except that in these microorganisms the reaction is catalysed by a single polypeptide (the product of the metA gene in Escherichia coli and the met5 gene product in Neurospora crassa). In Pseudomonas putida, as in Gram-positive bacteria and certain fungi, the second and third steps are a direct sulphydrylation that converts the O-acyl-L-homoserine into homocysteine and further methylation to yield methionine. The latter reaction can be mediated by either of the two methionine synthetases present in the cells . .
Probab=98.50  E-value=3.2e-08  Score=74.52  Aligned_cols=78  Identities=26%  Similarity=0.466  Sum_probs=56.9

Q ss_pred             HHHHHHHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCC--------CCCCCCCCCHHHHHHCCCCCCC
Q ss_conf             22356555310123321101246860566421421123312222333210--------0133322200244420110001
Q gi|254780875|r   75 RPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKG--------VGVDISCKALEIAKSNAVTNGV  146 (264)
Q Consensus        75 RpeTE~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v--------~~~Dis~~al~~A~~N~~~~~~  146 (264)
T Consensus         1 R~Dl~~I~~~I----------p~GSRVLDLGCGdG~LL~~-L~d~k~v~GPPttehRL~G~Eid~~~v~Ac~~R----G-   64 (205)
T TIGR02081         1 RVDLELILDLI----------PPGSRVLDLGCGDGELLAL-LRDEKQVRGPPTTEHRLYGIEIDQDGVLACVAR----G-   64 (205)
T ss_pred             CHHHHHHHHHC----------CCCCEEEEECCCCHHHHHH-HHHHCCCCCCCCCCCEEEEEEECHHHHHHHHHC----C-
T ss_conf             91578898616----------8887364101688789999-997437898887120001023454459999862----5-


Q ss_pred             CCCCCCCCCCCCCCC----CCHHHHHHHC
Q ss_conf             222222222222222----1002333201
Q gi|254780875|r  147 SERFDTLQSDWFSSV----EGLFDVIVSN  171 (264)
Q Consensus       147 ~~~i~~~~~d~~~~~----~~~fD~IvsN  171 (264)
T Consensus        65 ---v~VIq~Dld~GL~~F~D~~FD~ViLs   90 (205)
T TIGR02081        65 ---VSVIQGDLDEGLEAFPDKSFDYVILS   90 (205)
T ss_pred             ---CCEECCCCCCCCCCCCCCCCCEEEEC
T ss_conf             ---20130060034011678876625421