HHsearch alignment for GI: 254780875 and conserved domain: TIGR03533
>TIGR03533 L3_gln_methyl protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific. Members of this protein family methylate ribosomal protein L3 on a glutamine side chain. This family is related to HemK, a protein-glutamine methyltranferase for peptide chain release factors.
Probab=100.00 E-value=0 Score=505.62 Aligned_cols=255 Identities=27% Similarity=0.380 Sum_probs=235.0
Q ss_pred CHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHC-CCCHHHHCCCEEEEEEEEEEECCCCCHHHHHHH
Q ss_conf 7568999999998389998985044885898999999999998974-983768536314423767750462051223565
Q gi|254780875|r 2 QALRDSHSFLCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLK-HESIHRILGWRDFYNVRLTLSSDTFEPRPETEL 80 (264)
Q Consensus 2 ~a~~dA~~Ll~~~l~~~~~~l~~~~~~~l~~~~~~~l~~~i~rr~~-g~Pl~YIlg~~~F~~~~f~v~~~vLIPRpeTE~ 80 (264)
T Consensus 28 ~prldAe~LLa~~L~~~r~~l~~~~~~~l~~~e~~~~~~lv~RR~~~r~Pl~YI~G~~~F~gl~f~V~~~VLIPR~~tee 107 (284)
T TIGR03533 28 NAWDEAVYLVLHALHLPLDILEPFLDARLTPSEKERILELIERRIEERIPVAYLTNEAWFAGLEFYVDERVLIPRSPIAE 107 (284)
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCEECCCEEEECCCCEECCCCCHH
T ss_conf 99999999999996959756776324889999999999999999827985899848656738478868995438997199
Q ss_pred HHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55310123321101246860566421421123312222333210013332220024442011000122222222222222
Q gi|254780875|r 81 LVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS 160 (264)
Q Consensus 81 lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~ 160 (264)
T Consensus 108 Lv~~~l~~~---~~~~~~~~iLDlGtGSG~Iai~la~~~p~~~v~a~DiS~~Al~~A~~N~~~~~l~~rv~~~~~D~~~~ 184 (284)
T TIGR03533 108 LIEDGFAPW---LEPEPVKRILDLCTGSGCIAIACAYAFPEAEVDAVDISPDALAVAEINIERHGLEDRVTLIQSDLFAA 184 (284)
T ss_pred HHHHHHHHH---HCCCCCCEEEEECCCCHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEECCHHHH
T ss_conf 999999998---42367771555216807999999987899879999899999999999998608543368883514331
Q ss_pred CCC-HHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 210-0233320113332100122111112357543321011232102568999998537887899981766799999999
Q gi|254780875|r 161 VEG-LFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 (264)
Q Consensus 161 ~~~-~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~~~v~~ll 239 (264)
T Consensus 185 ~~~~~fDlIVSNPPYI~~~e~~~l~~ev~-~EP~~AL~gG~dGL~~yr~Ii~~a~~~L~pgG~l~lEiG~~Q-~~~~~~~ 262 (284)
T TIGR03533 185 LPGRKYDLIVSNPPYVDAEDMADLPAEYH-HEPELALASGEDGLDLVRRILAEAADHLNENGVLVVEVGNSM-EALEEAY 262 (284)
T ss_pred CCCCCCCEEEECCCCCCHHHHHHCCHHHC-CCCHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCH-HHHHHHC
T ss_conf 45777787997799788465544976411-586998758955879999999988984256978999979788-9999866
Q ss_pred HHCCCCEEEEEECCCCCCEEEEEEC
Q ss_conf 9789805899805689975999979
Q gi|254780875|r 240 ESRKLFLVNAFKDYGGNDRVLLFCR 264 (264)
Q Consensus 240 ~~~gf~~v~~~kD~~g~~R~vi~~r 264 (264)
T Consensus 263 ~~~~~~~~~~~---~~~~~~~~~~~ 284 (284)
T TIGR03533 263 PDVPFTWLEFE---NGGDGVFLLTR 284 (284)
T ss_pred CCCCCEEEEEC---CCCCEEEEEEC
T ss_conf 89996477415---89836999849