HHsearch alignment for GI: 254780875 and conserved domain: pfam01189
>pfam01189 Nol1_Nop2_Fmu NOL1/NOP2/sun family.
Probab=98.23 E-value=1.7e-06 Score=63.27 Aligned_cols=145 Identities=17% Similarity=0.139 Sum_probs=94.3
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCC-CCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC----CCCHHHHH
Q ss_conf 124686056642142112331222233-3210013332220024442011000122222222222222----21002333
Q gi|254780875|r 94 EKRDVVRILDLGTGTGAVCLALLKESP-FFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS----VEGLFDVI 168 (264)
Q Consensus 94 ~~~~~~~vLDlG~GsG~i~i~la~~~~-~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~----~~~~fD~I 168 (264)
T Consensus 81 ~p~~g~~VLD~CAaPGgKt~~la~l~~~~g~i~A~D~~~~Rl~~l~~~~~r~g~~~-~~~~~~d~~~~~~~~~~~~fD~v 159 (277)
T pfam01189 81 NPQEDEFILDMCAAPGGKTTHIAELMKNEGTVVAVDRNKQRLKRVYANIQRLGVFN-IIVQEGDARQIDQKLLGGEFDRI 159 (277)
T ss_pred CCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCC-EEEEECCCCCCCCCCCCCCCCEE
T ss_conf 88999989883678881699999875898779983797899999999999759974-79996644455743466666579
Q ss_pred HHCCHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCC---CCHHHHHHHHHHHCCCCCEEEEE---ECCCHHHH-HHHHHH
Q ss_conf 2011333210012211111235754332101-1232---10256899999853788789998---17667999-999999
Q gi|254780875|r 169 VSNPPYIESVIVDCLGLEVRDFDPRISLDGG-IDGL---SHYRTIADGVSRHLNKDGLCSVE---IGYNQKVD-VVRIFE 240 (264)
Q Consensus 169 vsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg-~dGl---~~~~~ii~~~~~~L~~~G~l~lE---ig~~q~~~-v~~ll~ 240 (264)
T Consensus 160 LvDaPCSg~G~~--------rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lvYsTCSi~~eENe~vV~~fL~ 231 (277)
T pfam01189 160 LLDAPCSGTGVI--------RRDPDIKWLRREADIAQLAELQKELLKAAWDLVKPGGVLVYSTCSVLPEENEAVIKYFLQ 231 (277)
T ss_pred EECCCCCCCCEE--------CCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 972898898634--------558531211999999999999999999999971769989999499998998999999998
Q ss_pred HC-CCCEE
Q ss_conf 78-98058
Q gi|254780875|r 241 SR-KLFLV 247 (264)
Q Consensus 241 ~~-gf~~v 247 (264)
T Consensus 232 ~~~~~~~~ 239 (277)
T pfam01189 232 KRPDVELV 239 (277)
T ss_pred HCCCCEEE
T ss_conf 69998990