HHsearch alignment for GI: 254780875 and conserved domain: pfam02005
>pfam02005 TRM N2,N2-dimethylguanosine tRNA methyltransferase. This enzyme EC:2.1.1.32 used S-AdoMet to methylate tRNA. The TRM1 gene of Saccharomyces cerevisiae is necessary for the N2,N2-dimethylguanosine modification of both mitochondrial and cytoplasmic tRNAs. The enzyme is found in both eukaryotes and archaebacteria
Probab=98.00 E-value=3.5e-06 Score=61.15 Aligned_cols=85 Identities=27% Similarity=0.271 Sum_probs=66.5
Q ss_pred CCCCCCCEEEEECCCCCCCCCCCCCCCCC-CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC---CCCHHHHHH
Q ss_conf 12468605664214211233122223332-10013332220024442011000122222222222222---210023332
Q gi|254780875|r 94 EKRDVVRILDLGTGTGAVCLALLKESPFF-KGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS---VEGLFDVIV 169 (264)
Q Consensus 94 ~~~~~~~vLDlG~GsG~i~i~la~~~~~~-~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~---~~~~fD~Iv 169 (264)
T Consensus 46 ~~~~~~~iLDalsasGiR~iRya~E~~~~~~V~~NDi~~~a~~~i~~N~~lN~~~~~~~~~~~DAn~lm~~~~~~fD~ID 125 (375)
T pfam02005 46 KLGRGIIVLDALSASGIRAIRFALEVPGVEEVFANDISPKAVELIKENVKLNEVENIVVINGDDANMLMRENHRRFDVID 125 (375)
T ss_pred CCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHCCCCCCEEE
T ss_conf 02588669754675419999999746998669995599899999999888659987378754759999985588675686
Q ss_pred HCC-----HHHHHH
Q ss_conf 011-----333210
Q gi|254780875|r 170 SNP-----PYIESV 178 (264)
Q Consensus 170 sNP-----PYI~~~ 178 (264)
T Consensus 126 lDPfGSp~pfldsA 139 (375)
T pfam02005 126 LDPFGSPAPFLDSA 139 (375)
T ss_pred ECCCCCCCHHHHHH
T ss_conf 78999921779999