HHsearch alignment for GI: 254780875 and conserved domain: pfam03291
>pfam03291 Pox_MCEL mRNA capping enzyme. This family of enzymes are related to pfam03919.
Probab=97.79 E-value=1.4e-05 Score=57.21 Aligned_cols=120 Identities=17% Similarity=0.176 Sum_probs=69.4
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCC---------CCCCCCCCCCCCCCC------
Q ss_conf 46860566421421123312222333210013332220024442011000---------122222222222222------
Q gi|254780875|r 96 RDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNG---------VSERFDTLQSDWFSS------ 160 (264)
Q Consensus 96 ~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~---------~~~~i~~~~~d~~~~------ 160 (264)
T Consensus 62 ~~~~~VLDl~CGkGGDL~K-w~~~~i~~~vgiDis~~sI~~A~~RY~~~~~~~~~~~~~~~f~~~f~~~D~~~~~l~~~~ 140 (327)
T pfam03291 62 KPKRKVLDLDCGKGGDLEK-YFKGGISGLIGTDIAEVSIEQAQERYNDLNSRSKSKYYKFDFIAEFITGDCFVSSVREVF 140 (327)
T ss_pred CCCCEEEEECCCCCCCHHH-HHHCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCHHHHHHHC
T ss_conf 8898799836866445788-974798689996689999999999999864211444456675001231562156787753
Q ss_pred --CCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHH
Q ss_conf --210023332011333210012211111235754332101123210256899999853788789998176679999999
Q gi|254780875|r 161 --VEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRI 238 (264)
Q Consensus 161 --~~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~~~v~~l 238 (264)
T Consensus 141 ~~~~~~FDvVS~QF------AiHY------~Fese----------~~a~~~l~Nvs~~Lk~GG~FIGT~~d--~~~i~~~ 196 (327)
T pfam03291 141 EPGQRKFDIVSWQF------AIHY------SFESE----------EKARTMLRNLAELLASGGKFIGTTPD--GDFIIKK 196 (327)
T ss_pred CCCCCCCCEEEHHH------HHHH------HHCCH----------HHHHHHHHHHHHHCCCCCEEEEEECC--HHHHHHH
T ss_conf 57788503775178------7898------76489----------99999999999860589889999667--8999999
Q ss_pred HH
Q ss_conf 99
Q gi|254780875|r 239 FE 240 (264)
Q Consensus 239 l~ 240 (264)
T Consensus 197 l~ 198 (327)
T pfam03291 197 LT 198 (327)
T ss_pred HH
T ss_conf 98