HHsearch alignment for GI: 254780875 and conserved domain: pfam03848

Probab=98.92  E-value=6.7e-10  Score=85.57  Aligned_cols=105  Identities=22%  Similarity=0.236  Sum_probs=81.4

Q ss_pred             CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCC-CCCHHHHHHHCCH
Q ss_conf             246860566421421123312222333210013332220024442011000122222222222222-2100233320113
Q gi|254780875|r   95 KRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFSS-VEGLFDVIVSNPP  173 (264)
Q Consensus        95 ~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~~-~~~~fD~IvsNPP  173 (264)
T Consensus        28 ~i~pgk~LDlgcG~GRNslyLa~~--G~~VtavD~n~~aL~~l~~ia~~e~l~--i~~~~~Din~~~~~e~YD~Iis---  100 (192)
T pfam03848        28 TVKPGKALDLGCGQGRNSLFLSLL--GYDVTAVDHNENSIANLQDIKEKENLD--IPTALYDINSASIDENYDFILS---  100 (192)
T ss_pred             HCCCCCEEEECCCCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHHCCCC--CEEEEECCCCCCCCCCCCEEEE---
T ss_conf             379974666047897318999868--991799979999999999999970997--5268731555687677687988---


Q ss_pred             HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEE
Q ss_conf             332100122111112357543321011232102568999998537887899981
Q gi|254780875|r  174 YIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEI  227 (264)
Q Consensus       174 YI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEi  227 (264)
T Consensus       101 ---TVvfmFL~~~------------------~ip~iI~~mq~~T~pGGynlIv~  133 (192)
T pfam03848       101 ---TVVLMFLQAE------------------RIPAIIANMQEHTNVGGYNLIVA  133 (192)
T ss_pred             ---EEEEEECCHH------------------HHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             ---8877731867------------------87799999998528998899997