HHsearch alignment for GI: 254780875 and conserved domain: pfam10237
>pfam10237 N6-adenineMlase Probable N6-adenine methyltransferase. This is a protein of approximately 200 residues which is conserved from plants to humans. It contains a highly conserved QFW motif close to the N-terminus and a DPPF motif in the centre. The DPPF motif is characteristic of N-6 adenine-specific DNA methylases, and this family is found in eukaryotes.
Probab=96.42 E-value=0.0035 Score=41.40 Aligned_cols=62 Identities=16% Similarity=0.294 Sum_probs=44.7
Q ss_pred CCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHH
Q ss_conf 22100233320113332100122111112357543321011232102568999998537887899981766799999999
Q gi|254780875|r 160 SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIF 239 (264)
Q Consensus 160 ~~~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G~l~lEig~~q~~~v~~ll 239 (264)
T Consensus 81 ~l~~~fD~vi~DPPFLsee--------------------------c~~K~a~t~~~L~k~~~kli~~Tg~~~~~~~~kll 134 (161)
T pfam10237 81 QLKGKFDRVIADPPFLSEE--------------------------CLTKTAITIKLLLKPDSKLLLCTGERMEDLAAKLL 134 (161)
T ss_pred HHHCCCCEEEECCCCCCHH--------------------------HHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHC
T ss_conf 9708678899899998999--------------------------99999999999808998799934899999999972
Q ss_pred HHCCCCEEEEE
Q ss_conf 97898058998
Q gi|254780875|r 240 ESRKLFLVNAF 250 (264)
Q Consensus 240 ~~~gf~~v~~~ 250 (264)
T Consensus 135 ---~~~~~~F~ 142 (161)
T pfam10237 135 ---GLKITDFL 142 (161)
T ss_pred ---CCEEEEEE
T ss_conf ---98241257