HHsearch alignment for GI: 254780875 and conserved domain: pfam11968
>pfam11968 DUF3321 Protein of unknown function (DUF3321). This family is conserved in fungi and is annotated as being a nucleolar protein.
Probab=96.47 E-value=0.019 Score=36.53 Aligned_cols=129 Identities=20% Similarity=0.277 Sum_probs=75.8
Q ss_pred HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf 55531012332110124686056642142112331222233321001333222002444201100012222222222222
Q gi|254780875|r 80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS 159 (264)
Q Consensus 80 ~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~ 159 (264)
T Consensus 35 ~lv~wL~~~~~~~~~~~~~lr~LEVGALst~N~~S---~~~~~dv~rIDLnSq----------~p~------I~qqDFme 95 (220)
T pfam11968 35 VLVEWLKPLLVRLKLGEGKLRALEVGALSTKNACS---KSGLFDVTRIDLNSQ----------EPG------ILQQDFME 95 (220)
T ss_pred HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHC---CCCEEEEEEEECCCC----------CCC------CHHHHHHH
T ss_conf 99999777357722377763177554556421222---567477788525899----------987------14432440
Q ss_pred -----CCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-----EEEEEEC-
Q ss_conf -----22100233320113332100122111112357543321011232102568999998537887-----8999817-
Q gi|254780875|r 160 -----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-----LCSVEIG- 228 (264)
Q Consensus 160 -----~~~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G-----~l~lEig- 228 (264)
T Consensus 96 rPlP~~e~e~F~iISlS--------------LVLNfVP~~~~RG---------eML~r~~~fL~~~~~~~~~~lFlVLPl 152 (220)
T pfam11968 96 RPLPKDESEKFDIISLS--------------LVLNFVPDPADRG---------EMLKRTTKFLRPPGPGSPPSLFLVLPL 152 (220)
T ss_pred CCCCCCCCCCCCEEEEE--------------EEEECCCCHHHHH---------HHHHHHHHHHCCCCCCCCCEEEEEEEH
T ss_conf 77888831141358887--------------7774169878886---------999999997179976666326887324
Q ss_pred -------CCHHHHHHHHHHHCCCCEEEEE
Q ss_conf -------6679999999997898058998
Q gi|254780875|r 229 -------YNQKVDVVRIFESRKLFLVNAF 250 (264)
Q Consensus 229 -------~~q~~~v~~ll~~~gf~~v~~~ 250 (264)
T Consensus 153 pCv~NSRY~~~~~l~~im~slGf~~~~~k 181 (220)
T pfam11968 153 PCVTNSRYMDEERLQAIMSSLGFVLVKSK 181 (220)
T ss_pred HHHHCCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf 56404400199999999996795588764