HHsearch alignment for GI: 254780875 and conserved domain: pfam11968

>pfam11968 DUF3321 Protein of unknown function (DUF3321). This family is conserved in fungi and is annotated as being a nucleolar protein.
Probab=96.47  E-value=0.019  Score=36.53  Aligned_cols=129  Identities=20%  Similarity=0.277  Sum_probs=75.8

Q ss_pred             HHHHHHCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCC
Q ss_conf             55531012332110124686056642142112331222233321001333222002444201100012222222222222
Q gi|254780875|r   80 LLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDISCKALEIAKSNAVTNGVSERFDTLQSDWFS  159 (264)
Q Consensus        80 ~lv~~~l~~~~~~~~~~~~~~vLDlG~GsG~i~i~la~~~~~~~v~~~Dis~~al~~A~~N~~~~~~~~~i~~~~~d~~~  159 (264)
T Consensus        35 ~lv~wL~~~~~~~~~~~~~lr~LEVGALst~N~~S---~~~~~dv~rIDLnSq----------~p~------I~qqDFme   95 (220)
T pfam11968        35 VLVEWLKPLLVRLKLGEGKLRALEVGALSTKNACS---KSGLFDVTRIDLNSQ----------EPG------ILQQDFME   95 (220)
T ss_pred             HHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHC---CCCEEEEEEEECCCC----------CCC------CHHHHHHH
T ss_conf             99999777357722377763177554556421222---567477788525899----------987------14432440


Q ss_pred             -----CCCCHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCC-----EEEEEEC-
Q ss_conf             -----22100233320113332100122111112357543321011232102568999998537887-----8999817-
Q gi|254780875|r  160 -----SVEGLFDVIVSNPPYIESVIVDCLGLEVRDFDPRISLDGGIDGLSHYRTIADGVSRHLNKDG-----LCSVEIG-  228 (264)
Q Consensus       160 -----~~~~~fD~IvsNPPYI~~~~~~~l~~~v~~~EP~~AL~gg~dGl~~~~~ii~~~~~~L~~~G-----~l~lEig-  228 (264)
T Consensus        96 rPlP~~e~e~F~iISlS--------------LVLNfVP~~~~RG---------eML~r~~~fL~~~~~~~~~~lFlVLPl  152 (220)
T pfam11968        96 RPLPKDESEKFDIISLS--------------LVLNFVPDPADRG---------EMLKRTTKFLRPPGPGSPPSLFLVLPL  152 (220)
T ss_pred             CCCCCCCCCCCCEEEEE--------------EEEECCCCHHHHH---------HHHHHHHHHHCCCCCCCCCEEEEEEEH
T ss_conf             77888831141358887--------------7774169878886---------999999997179976666326887324


Q ss_pred             -------CCHHHHHHHHHHHCCCCEEEEE
Q ss_conf             -------6679999999997898058998
Q gi|254780875|r  229 -------YNQKVDVVRIFESRKLFLVNAF  250 (264)
Q Consensus       229 -------~~q~~~v~~ll~~~gf~~v~~~  250 (264)
T Consensus       153 pCv~NSRY~~~~~l~~im~slGf~~~~~k  181 (220)
T pfam11968       153 PCVTNSRYMDEERLQAIMSSLGFVLVKSK  181 (220)
T ss_pred             HHHHCCCCCCHHHHHHHHHHCCCEEEEEE
T ss_conf             56404400199999999996795588764