RPSBLAST alignment for GI: 254780875 and conserved domain: TIGR03534

>gnl|CDD|163311 TIGR03534, RF_mod_PrmC, protein-(glutamine-N5) methyltransferase, release factor-specific. Members of this protein family are HemK (PrmC), a protein once thought to be involved in heme biosynthesis but now recognized to be a protein-glutamine methyltransferase that modifies the peptide chain release factors. All members of the seed alignment are encoded next to the release factor 1 gene (prfA) and confirmed by phylogenetic analysis. SIMBAL analysis (manuscript in prep.) shows the motif [LIV]PRx[DE]TE (in Escherichia coli, IPRPDTE) confers specificity for the release factors rather than for ribosomal protein L3. Length = 251
 Score =  258 bits (661), Expect = 1e-69
 Identities = 102/252 (40%), Positives = 138/252 (54%), Gaps = 7/252 (2%)

Query: 11  LCRVTGLSSHQVIVDPDSVLDDRQRFFLTNAIVRSLKHESIHRILGWRDFYNVRLTLSSD 70
           L  V G     +++ P+  L   +       + R  K E +  ILG R+FY +   +S  
Sbjct: 6   LAHVLGKDRTDLLLHPEKELTPEELARFEALLARRAKGEPVAYILGEREFYGLDFKVSPG 65

Query: 71  TFEPRPETELLVDSALAFSLPRIEKRDVVRILDLGTGTGAVCLALLKESPFFKGVGVDIS 130
              PRP+TE LV++AL     R++K  + R+LDLGTG+GA+ LAL KE P  +   VDIS
Sbjct: 66  VLIPRPDTEELVEAALE----RLKKGPL-RVLDLGTGSGAIALALAKERPDARVTAVDIS 120

Query: 131 CKALEIAKSNAVTNGVSERFDTLQSDWFSSVEGL-FDVIVSNPPYIESVIVDCLGLEVRD 189
            +AL +A+ NA   G+ +    LQSDWF  + G  FD+IVSNPPYI    +  L  EVR 
Sbjct: 121 PEALAVARKNAARLGL-DNVTFLQSDWFEPLPGGKFDLIVSNPPYIPEADIHLLDPEVRF 179

Query: 190 FDPRISLDGGIDGLSHYRTIADGVSRHLNKDGLCSVEIGYNQKVDVVRIFESRKLFLVNA 249
            +PR++L GG DGL  YR I     R L   G   +EIGY+Q   V  +FE+     V  
Sbjct: 180 HEPRLALFGGEDGLDFYRRIIAQAPRLLKPGGWLLLEIGYDQGEAVRALFEAAGFADVET 239

Query: 250 FKDYGGNDRVLL 261
            KD  G DRV+L
Sbjct: 240 RKDLAGKDRVVL 251