HHsearch alignment for GI: 254780877 and conserved domain: CHL00195
>CHL00195 ycf46 Ycf46; Provisional.
Probab=99.39 E-value=7e-10 Score=99.28 Aligned_cols=139 Identities=22% Similarity=0.331 Sum_probs=101.7
Q ss_pred CEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCH
Q ss_conf 66895288740777999999987348998444574378873135421745420245458999999860799769996362
Q gi|254780877|r 201 NPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDEL 280 (853)
Q Consensus 201 n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~ 280 (853)
T Consensus 261 GvLL~GpPG~GKtl~AKAvA~e----------~~~p~l~l~~~~l~~--~~vGesE~~~r~~f~~A~~~-aP~ilfiDEi 327 (491)
T CHL00195 261 GLLLVGIQGTGKSLTAKAIANE----------WNLPLLRLDVGKLFG--GIVGESESRMRQMIQLAETI-SPCILWIDEI 327 (491)
T ss_pred EEEEECCCCCCHHHHHHHHHHH----------HCCCEEEEEHHHHHH--HHCCHHHHHHHHHHHHHHHH-CCEEEEEEHH
T ss_conf 7999799998789999999866----------389469966799756--00670499999999999861-9858997465
Q ss_pred HHHCCCCCCC--CCCC---HHHHHHHHHC-CCCEEEEEEECHHHHHHHHHCCHHHHH--CCCE-EECCCCCHHHHHHHHH
Q ss_conf 7730266655--4335---8888765312-466048997448999997300111320--2311-1115777678999999
Q gi|254780877|r 281 HVLVGAGKTD--GAMD---ASNLLKPSLA-RGELHCIGATTLDEYRKYIEKDPALAR--RFQS-LLVGEPTVTDTISILR 351 (853)
Q Consensus 281 h~~~gaG~~~--g~~D---aan~LKP~La-rG~l~~IgaTT~~Eyrk~iEkD~Al~R--RFq~-i~V~Eps~~~t~~iL~ 351 (853)
T Consensus 328 dk~~~~~~~~~d~g~s~rv~~~~Lt-~m~e~~~~VfViattN~----~~~L~pellR~GRFD~~~~v~lP~~~~R~~I~~ 402 (491)
T CHL00195 328 DKAFSGLDSKGDSGTSNRVLATFIT-WLSEKKSPVFVVATANN----IDSLPLELLRKGRFDEIFFLDLPNLEERELIFK 402 (491)
T ss_pred HHHCCCCCCCCCCCHHHHHHHHHHH-HHCCCCCCEEEEEECCC----CCCCCHHHCCCCCCCEEEECCCCCHHHHHHHHH
T ss_conf 4542588888887232899999999-86468997699995899----755898770898777047648959899999999
Q ss_pred HHHHHH
Q ss_conf 978986
Q gi|254780877|r 352 GLKERY 357 (853)
Q Consensus 352 gl~~~y 357 (853)
T Consensus 403 ihl~~~ 408 (491)
T CHL00195 403 IHLKRF 408 (491)
T ss_pred HHHHCC
T ss_conf 998544