HHsearch alignment for GI: 254780877 and conserved domain: COG0593

>COG0593 DnaA ATPase involved in DNA replication initiation [DNA replication, recombination, and repair].
Probab=98.40  E-value=0.00042  Score=52.29  Aligned_cols=155  Identities=19%  Similarity=0.312  Sum_probs=97.9

Q ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHH----HHHHHHCCCCE
Q ss_conf             77866895288740777999999987348998444574378873135421745420245458999----99986079976
Q gi|254780877|r  198 TKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSL----LCEIRSEDGEI  273 (853)
Q Consensus       198 ~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i----~~~~~~~~~~~  273 (853)
T Consensus       112 ~~nplfi~G~~GlGKTHLl~Aign~~~~~~~-----~a~v~y~~se~f~---------~~~v~a~~~~~~~~Fk~~y~~d  177 (408)
T COG0593         112 AYNPLFIYGGVGLGKTHLLQAIGNEALANGP-----NARVVYLTSEDFT---------NDFVKALRDNEMEKFKEKYSLD  177 (408)
T ss_pred             CCCCEEEECCCCCCHHHHHHHHHHHHHHHCC-----CCEEEECCHHHHH---------HHHHHHHHHHHHHHHHHHHCCC
T ss_conf             6895799879999789999999999986299-----8648850489989---------9999998850488888764267


Q ss_pred             EEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEE--CHHHHHHHHHCCHHHHHCCC---EEECCCCCHHHHHH
Q ss_conf             99963627730266655433588887653124660489974--48999997300111320231---11115777678999
Q gi|254780877|r  274 ILFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHCIGAT--TLDEYRKYIEKDPALARRFQ---SLLVGEPTVTDTIS  348 (853)
Q Consensus       274 ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l~~IgaT--T~~Eyrk~iEkD~Al~RRFq---~i~V~Eps~~~t~~  348 (853)
T Consensus       178 lllIDDiq~l~gk~~~q--eefFh~FN~l~~~~k-qIvltsdr~P~~l~~---~~~rL~SR~~~Gl~~~I~~Pd~e~r~a  251 (408)
T COG0593         178 LLLIDDIQFLAGKERTQ--EEFFHTFNALLENGK-QIVLTSDRPPKELNG---LEDRLRSRLEWGLVVEIEPPDDETRLA  251 (408)
T ss_pred             EEEECHHHHHCCCHHHH--HHHHHHHHHHHHCCC-EEEEECCCCCHHHCC---CCHHHHHHHHCEEEEEECCCCHHHHHH
T ss_conf             35551386756771579--999999998885088-799970788322110---358899898630577527988899999


Q ss_pred             HHHHHHHHHHHHCCCCCCHHHHHHHHHH
Q ss_conf             9999789865414961015899999863
Q gi|254780877|r  349 ILRGLKERYEQHHKVRISDSALVSAAVL  376 (853)
Q Consensus       349 iL~gl~~~yE~~H~V~i~d~al~~av~l  376 (853)
T Consensus       252 iL~kk----a~~~~~~i~~ev~~~la~~  275 (408)
T COG0593         252 ILRKK----AEDRGIEIPDEVLEFLAKR  275 (408)
T ss_pred             HHHHH----HHHCCCCCCHHHHHHHHHH
T ss_conf             99999----9865888887999999997