HHsearch alignment for GI: 254780877 and conserved domain: COG1223
>COG1223 Predicted ATPase (AAA+ superfamily) [General function prediction only].
Probab=98.55 E-value=2.3e-06 Score=70.73 Aligned_cols=169 Identities=27% Similarity=0.432 Sum_probs=119.9
Q ss_pred HHHHHCCCCCCCCCHHHHHHHHHHHHCCC----------CCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEE
Q ss_conf 69987298533333578999999963367----------77866895288740777999999987348998444574378
Q gi|254780877|r 169 TEEARNGKLDPVIGRDDEMRRAIQVLSRR----------TKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLM 238 (853)
Q Consensus 169 Te~Ar~GkLDPVIGRe~EI~~~~~iL~r~----------~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~ 238 (853)
T Consensus 112 ~e~~~~it~ddViGqEeA-K~kcrli~~yLenPe~Fg~WAPknVLFyGppGTGKTm~Akalan---e~kvp-------~l 180 (368)
T COG1223 112 REIISDITLDDVIGQEEA-KRKCRLIMEYLENPERFGDWAPKNVLFYGPPGTGKTMMAKALAN---EAKVP-------LL 180 (368)
T ss_pred HHHHCCCCHHHHHCHHHH-HHHHHHHHHHHHCHHHHCCCCCCEEEEECCCCCCHHHHHHHHHC---CCCCC-------EE
T ss_conf 566136617664163988-88879999996496876345754168778999648799998725---45785-------48
Q ss_pred EEEHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHH-CCCCCCCCCCCHHHHHHHHH-------CCCCEEE
Q ss_conf 873135421745420245458999999860799769996362773-02666554335888876531-------2466048
Q gi|254780877|r 239 ALDMGALIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVL-VGAGKTDGAMDASNLLKPSL-------ARGELHC 310 (853)
Q Consensus 239 ~ld~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~-~gaG~~~g~~Daan~LKP~L-------arG~l~~ 310 (853)
T Consensus 181 ~vkat~liG--ehVGdgar~Ihely~rA~~~a-PcivFiDE~DAiaLdRryQelRGDVsEiVNALLTelDgi~eneGVvt 257 (368)
T COG1223 181 LVKATELIG--EHVGDGARRIHELYERARKAA-PCIVFIDELDAIALDRRYQELRGDVSEIVNALLTELDGIKENEGVVT 257 (368)
T ss_pred EECHHHHHH--HHHHHHHHHHHHHHHHHHHCC-CEEEEEHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEEE
T ss_conf 711688888--774359899999999887519-84998400245553045788645499999999985017445775699
Q ss_pred EEEECHHHHHHHHHCCHHHHHCCC-EEECCCCCHHHHHHHHHHHHHH
Q ss_conf 997448999997300111320231-1111577767899999997898
Q gi|254780877|r 311 IGATTLDEYRKYIEKDPALARRFQ-SLLVGEPTVTDTISILRGLKER 356 (853)
Q Consensus 311 IgaTT~~Eyrk~iEkD~Al~RRFq-~i~V~Eps~~~t~~iL~gl~~~ 356 (853)
T Consensus 258 IaaTN~p~~-----LD~aiRsRFEeEIEF~LP~~eEr~~ile~y~k~ 299 (368)
T COG1223 258 IAATNRPEL-----LDPAIRSRFEEEIEFKLPNDEERLEILEYYAKK 299 (368)
T ss_pred EEECCCHHH-----CCHHHHHHHHHEEEEECCCHHHHHHHHHHHHHH
T ss_conf 950598465-----078888655650656488858999999998985