HHsearch alignment for GI: 254780877 and conserved domain: COG1474
>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=98.76 E-value=6.9e-06 Score=66.78 Aligned_cols=207 Identities=21% Similarity=0.322 Sum_probs=136.0
Q ss_pred CCCHHHHHHHHHHHH----CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEH----------HHH
Q ss_conf 333578999999963----367778668952887407779999999873489984445743788731----------354
Q gi|254780877|r 180 VIGRDDEMRRAIQVL----SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDM----------GAL 245 (853)
Q Consensus 180 VIGRe~EI~~~~~iL----~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~----------~~l 245 (853)
T Consensus 19 l~~Re~ei~~l~~~l~~~~~~~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~-~--~~--~~yINc~~~~t~~~i~~~i 93 (366)
T COG1474 19 LPHREEEINQLASFLAPALRGERPSNIIIYGPTGTGKTATVKFVMEELEESSA-N--VE--VVYINCLELRTPYQVLSKI 93 (366)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC-C--CC--EEEEEEEECCCHHHHHHHH
T ss_conf 10348899999999999855899860799889998732899999999973315-6--75--7999513078787999999
Q ss_pred HC---CCCCCCH-HHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHH-HHCCCCEEEEEEECHHHHH
Q ss_conf 21---7454202-45458999999860799769996362773026665543358888765-3124660489974489999
Q gi|254780877|r 246 IA---GAKFRGE-FEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKP-SLARGELHCIGATTLDEYR 320 (853)
Q Consensus 246 ~a---g~~~rg~-~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP-~LarG~l~~IgaTT~~Eyr 320 (853)
T Consensus 94 ~~~~~~~p~~g~~~~~~~~~l~~~~~~~~~~~IvvLDEid~L~~~~~-~-~--LY~L~r~~~~~~~~v~vi~i~n~~~~~ 169 (366)
T COG1474 94 LNKLGKVPLTGDSSLEILKRLYDNLSKKGKTVIVILDEVDALVDKDG-E-V--LYSLLRAPGENKVKVSIIAVSNDDKFL 169 (366)
T ss_pred HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCC-C-H--HHHEECCCCCCCEEEEEEEEECCHHHH
T ss_conf 99826899767632689999999777418759999764765415464-1-4--551112477675379999973548899
Q ss_pred HHHHCCHHHHHCCCE--EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf 973001113202311--111577767899999997898654149610158999998633320245767477899999999
Q gi|254780877|r 321 KYIEKDPALARRFQS--LLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDEAS 398 (853)
Q Consensus 321 k~iEkD~Al~RRFq~--i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA~ 398 (853)
T Consensus 170 ~~l--d~rv~s~l~~~~I~F~pY~a~el~~Il~~R~~--~~~~~~~~~~~vl~lia~~~a~~~GD---AR~aidilr~A~ 242 (366)
T COG1474 170 DYL--DPRVKSSLGPSEIVFPPYTAEELYDILRERVE--EGFSAGVIDDDVLKLIAALVAAESGD---ARKAIDILRRAG 242 (366)
T ss_pred HHH--HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHCCCC---HHHHHHHHHHHH
T ss_conf 987--56676506876355289898999999999998--54046874803999999988761864---776089999999
Q ss_pred HHHH
Q ss_conf 9875
Q gi|254780877|r 399 ARVR 402 (853)
Q Consensus 399 A~~~ 402 (853)
T Consensus 243 eiAe 246 (366)
T COG1474 243 EIAE 246 (366)
T ss_pred HHHH
T ss_conf 9865