HHsearch alignment for GI: 254780877 and conserved domain: COG1474

>COG1474 CDC6 Cdc6-related protein, AAA superfamily ATPase [DNA replication, recombination, and repair / Posttranslational modification, protein turnover, chaperones].
Probab=98.76  E-value=6.9e-06  Score=66.78  Aligned_cols=207  Identities=21%  Similarity=0.322  Sum_probs=136.0

Q ss_pred             CCCHHHHHHHHHHHH----CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEH----------HHH
Q ss_conf             333578999999963----367778668952887407779999999873489984445743788731----------354
Q gi|254780877|r  180 VIGRDDEMRRAIQVL----SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDM----------GAL  245 (853)
Q Consensus       180 VIGRe~EI~~~~~iL----~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~----------~~l  245 (853)
T Consensus        19 l~~Re~ei~~l~~~l~~~~~~~~p~n~~iyG~~GTGKT~~~~~v~~~l~~~~~-~--~~--~~yINc~~~~t~~~i~~~i   93 (366)
T COG1474          19 LPHREEEINQLASFLAPALRGERPSNIIIYGPTGTGKTATVKFVMEELEESSA-N--VE--VVYINCLELRTPYQVLSKI   93 (366)
T ss_pred             CCCHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHCC-C--CC--EEEEEEEECCCHHHHHHHH
T ss_conf             10348899999999999855899860799889998732899999999973315-6--75--7999513078787999999


Q ss_pred             HC---CCCCCCH-HHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHH-HHCCCCEEEEEEECHHHHH
Q ss_conf             21---7454202-45458999999860799769996362773026665543358888765-3124660489974489999
Q gi|254780877|r  246 IA---GAKFRGE-FEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTDGAMDASNLLKP-SLARGELHCIGATTLDEYR  320 (853)
Q Consensus       246 ~a---g~~~rg~-~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP-~LarG~l~~IgaTT~~Eyr  320 (853)
T Consensus        94 ~~~~~~~p~~g~~~~~~~~~l~~~~~~~~~~~IvvLDEid~L~~~~~-~-~--LY~L~r~~~~~~~~v~vi~i~n~~~~~  169 (366)
T COG1474          94 LNKLGKVPLTGDSSLEILKRLYDNLSKKGKTVIVILDEVDALVDKDG-E-V--LYSLLRAPGENKVKVSIIAVSNDDKFL  169 (366)
T ss_pred             HHHHCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEECCHHHHHCCCC-C-H--HHHEECCCCCCCEEEEEEEEECCHHHH
T ss_conf             99826899767632689999999777418759999764765415464-1-4--551112477675379999973548899


Q ss_pred             HHHHCCHHHHHCCCE--EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHH
Q ss_conf             973001113202311--111577767899999997898654149610158999998633320245767477899999999
Q gi|254780877|r  321 KYIEKDPALARRFQS--LLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDEAS  398 (853)
Q Consensus       321 k~iEkD~Al~RRFq~--i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA~  398 (853)
T Consensus       170 ~~l--d~rv~s~l~~~~I~F~pY~a~el~~Il~~R~~--~~~~~~~~~~~vl~lia~~~a~~~GD---AR~aidilr~A~  242 (366)
T COG1474         170 DYL--DPRVKSSLGPSEIVFPPYTAEELYDILRERVE--EGFSAGVIDDDVLKLIAALVAAESGD---ARKAIDILRRAG  242 (366)
T ss_pred             HHH--HHHHHHCCCCCEEEECCCCHHHHHHHHHHHHH--HHHCCCCCCHHHHHHHHHHHHHCCCC---HHHHHHHHHHHH
T ss_conf             987--56676506876355289898999999999998--54046874803999999988761864---776089999999


Q ss_pred             HHHH
Q ss_conf             9875
Q gi|254780877|r  399 ARVR  402 (853)
Q Consensus       399 A~~~  402 (853)
T Consensus       243 eiAe  246 (366)
T COG1474         243 EIAE  246 (366)
T ss_pred             HHHH
T ss_conf             9865