HHsearch alignment for GI: 254780877 and conserved domain: COG1936
>COG1936 Predicted nucleotide kinase (related to CMP and AMP kinases) [Nucleotide transport and metabolism].
Probab=96.99 E-value=0.009 Score=41.48 Aligned_cols=143 Identities=19% Similarity=0.277 Sum_probs=77.2
Q ss_pred EEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHHHCCCCHHCCCCCCCCCCHHHHCCCCCEEEEHHHH
Q ss_conf 98726786168899999998723776530022447740345320130477112035667742113221564102202144
Q gi|254780877|r 601 FMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRLIGSPPGYVGYEEGGALTEAVRRHPYQVVLFDEIE 680 (853)
Q Consensus 601 flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~LiGappGYvG~~~gg~Lte~vr~~P~sVil~DEiE 680 (853)
T Consensus 3 I~ITGTPGvGKTT~~~~L~-~l-g----~~~i~l~el~---------~e~~~~~~~de~-------r--~s~~vD~d~~~ 58 (180)
T COG1936 3 IAITGTPGVGKTTVCKLLR-EL-G----YKVIELNELA---------KENGLYTEYDEL-------R--KSVIVDVDKLR 58 (180)
T ss_pred EEEECCCCCCHHHHHHHHH-HH-C----CCEEEHHHHH---------HHCCCEECCCCC-------C--CEEEEEHHHHH
T ss_conf 7993799986687999999-82-9----8466199999---------866971143776-------6--15886679999
Q ss_pred HCCHHHHHHHHHHHHCCEEECCCC-CEEECCCCEEEECCCHHH--HHHHC---CHHHHHHHHHHHHHHHCCHHHHCCCCC
Q ss_conf 149899999999840457887999-778303315595485126--87640---326799999999986288577266681
Q gi|254780877|r 681 KAHSDVHNILLQVLDDGRLTDSQG-RTVDFRNTLIIMTSNLGA--EYLIE---DGDSVHDKVMGIVRSAFKPEFLNRLDE 754 (853)
Q Consensus 681 Kah~~v~~~llqild~G~ltd~~G-~~v~f~n~iii~TsN~G~--~~~~~---~~~~~~~~~~~~l~~~f~peflnRid~ 754 (853)
T Consensus 59 ~~le~~---~---~~~~~Ivd~H~~hl~~~~dlVvVLR~~p~~L~~RLk~RGy~~eKI~ENveAEi~~vi~~EA~E~~~~ 132 (180)
T COG1936 59 KRLEEL---L---REGSGIVDSHLSHLLPDCDLVVVLRADPEVLYERLKGRGYSEEKILENVEAEILDVILIEAVERFEA 132 (180)
T ss_pred HHHHHH---H---CCCCEEEECHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 888887---5---0588476126662178788899971898999999987699878988779999999999999973476
Q ss_pred EEECCCCCHHHHHHHHHHHH
Q ss_conf 58628899899999999999
Q gi|254780877|r 755 IILFEKLRKEDMAKIVRIQL 774 (853)
Q Consensus 755 iv~F~~l~~~~~~~i~~~~l 774 (853)
T Consensus 133 v~evdt-t~~s~ee~~~~i~ 151 (180)
T COG1936 133 VIEVDT-TNRSPEEVAEEII 151 (180)
T ss_pred EEEEEC-CCCCHHHHHHHHH
T ss_conf 499978-9999999999999