HHsearch alignment for GI: 254780877 and conserved domain: COG2256

Probab=99.43  E-value=4.5e-12  Score=117.07  Aligned_cols=193  Identities=28%  Similarity=0.418  Sum_probs=134.5

Q ss_pred             HHHHHHHCCCCCCCCC------HHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEE
Q ss_conf             3569987298533333------5789999999633677786689528874077799999998734899844457437887
Q gi|254780877|r  167 DLTEEARNGKLDPVIG------RDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMAL  240 (853)
Q Consensus       167 DLTe~Ar~GkLDPVIG------Re~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~l  240 (853)
T Consensus        13 PLA~rmRP~~lde~vGQ~HLlg~~~~lrr~v~---~~~l~SmIl~GPPG~GKTTlA~liA~~~----------~~~f~~~   79 (436)
T COG2256          13 PLAERLRPKSLDEVVGQEHLLGEGKPLRRAVE---AGHLHSMILWGPPGTGKTTLARLIAGTT----------NAAFEAL   79 (436)
T ss_pred             CHHHHHCCCCHHHHCCHHHHHCCCCHHHHHHH---CCCCCEEEEECCCCCCHHHHHHHHHHHH----------CCCEEEE
T ss_conf             76777097778785571866189943899996---4998605777899988889999998761----------7766995


Q ss_pred             EHHHHHCCCCCCCHHHHHHHHHHHHHHHCCC---CEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECHH
Q ss_conf             3135421745420245458999999860799---7699963627730266655433588887653124660489974489
Q gi|254780877|r  241 DMGALIAGAKFRGEFEERLKSLLCEIRSEDG---EIILFIDELHVLVGAGKTDGAMDASNLLKPSLARGELHCIGATTLD  317 (853)
Q Consensus       241 d~~~l~ag~~~rg~~e~r~~~i~~~~~~~~~---~~ilfide~h~~~gaG~~~g~~Daan~LKP~LarG~l~~IgaTT~~  317 (853)
T Consensus        80 s--Av~~gv-------kdlr~i~e~a~~~~~~gr~tiLflDEIHRfnK---~--Q---QD~lLp~vE~G~iilIGATTEN  142 (436)
T COG2256          80 S--AVTSGV-------KDLREIIEEARKNRLLGRRTILFLDEIHRFNK---A--Q---QDALLPHVENGTIILIGATTEN  142 (436)
T ss_pred             C--CCCCCH-------HHHHHHHHHHHHHHHCCCCEEEEEEHHHHCCH---H--H---HHHHHHHHCCCEEEEEECCCCC
T ss_conf             1--523467-------99999999999987258834998722533374---4--5---6551033248868999626789


Q ss_pred             HHHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHH-HHHHHHHHC--CCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             99997300111320231111157776789999999-789865414--961015899999863332024576747789999
Q gi|254780877|r  318 EYRKYIEKDPALARRFQSLLVGEPTVTDTISILRG-LKERYEQHH--KVRISDSALVSAAVLSNRYITDRFLPDKAIDLM  394 (853)
Q Consensus       318 Eyrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~g-l~~~yE~~H--~V~i~d~al~~av~ls~rYi~~r~lPDKAIDll  394 (853)
T Consensus       143 Ps---F~ln~ALlSR~~vf~lk~L~~~di~~~l~ra~~~~~rgl~~~~~~i~~~a~~~l~~~s~GD------~R~aLN~L  213 (436)
T COG2256         143 PS---FELNPALLSRARVFELKPLSSEDIKKLLKRALLDEERGLGGQIIVLDEEALDYLVRLSNGD------ARRALNLL  213 (436)
T ss_pred             CC---EEECHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCH------HHHHHHHH
T ss_conf             87---1403888611041565169989999999999865413777655668889999999862861------99998899


Q ss_pred             HHHH
Q ss_conf             9999
Q gi|254780877|r  395 DEAS  398 (853)
Q Consensus       395 DeA~  398 (853)
T Consensus       214 E~~~  217 (436)
T COG2256         214 ELAA  217 (436)
T ss_pred             HHHH
T ss_conf             9999