HHsearch alignment for GI: 254780877 and conserved domain: KOG0478

Probab=95.46  E-value=0.27  Score=29.53  Aligned_cols=171  Identities=21%  Similarity=0.304  Sum_probs=87.2

Q ss_pred             CCEEEECCCCCCHHHHHHHHHHHHHCCCCC-------HHHC-------CCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHH
Q ss_conf             866895288740777999999987348998-------4445-------74378873135421745420245458999999
Q gi|254780877|r  200 NNPVLIGDPGVGKTAIIEGLASRIINGDIP-------ESLK-------GKRLMALDMGALIAGAKFRGEFEERLKSLLCE  265 (853)
Q Consensus       200 ~n~~lvGe~GvGKtaive~la~~i~~~~vp-------~~l~-------~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~  265 (853)
T Consensus       463 INILL~GDPGtsKSqlLqyv~~l~pRg~yTSGkGsSavGLTayVtrd~dtkqlVLesGALVL------------------  524 (804)
T KOG0478         463 INILLVGDPGTSKSQLLQYCHRLLPRGVYTSGKGSSAVGLTAYVTKDPDTRQLVLESGALVL------------------  524 (804)
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCCHHCCEEEEEECCCCCEEEEECCCEEE------------------
T ss_conf             22899469986789999999974775404058763022003567765765546650484897------------------


Q ss_pred             HHHCCCCEEEEECCHHHHCCCCCC---------CCCCCHHHHHHHHHCCCCEEEEEEECHHH----HHHHH----HCCHH
Q ss_conf             860799769996362773026665---------54335888876531246604899744899----99973----00111
Q gi|254780877|r  266 IRSEDGEIILFIDELHVLVGAGKT---------DGAMDASNLLKPSLARGELHCIGATTLDE----YRKYI----EKDPA  328 (853)
Q Consensus       266 ~~~~~~~~ilfide~h~~~gaG~~---------~g~~Daan~LKP~LarG~l~~IgaTT~~E----yrk~i----EkD~A  328 (853)
T Consensus       525 ---SD-~GiCCIDEFDKM~dStrSvLhEvMEQQTvSIAKAGII~sLNAR--~SVLAaANP~~skynp~k~i~eNI~Lppt  598 (804)
T KOG0478         525 ---SD-NGICCIDEFDKMSDSTRSVLHEVMEQQTLSIAKAGIIASLNAR--CSVLAAANPIRSKYNPNKSIIENINLPPT  598 (804)
T ss_pred             ---CC-CCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCC--CEEEEEECCCCCCCCCCCCHHHCCCCCHH
T ss_conf             ---28-9657711233332778899999998763117430223421665--30344535432457999762321678805


Q ss_pred             HHHCCCEEE--CCCCCHHHHHHHHHHHHHHH-HHH---CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHH
Q ss_conf             320231111--15777678999999978986-541---4961015899999863332024576747789999
Q gi|254780877|r  329 LARRFQSLL--VGEPTVTDTISILRGLKERY-EQH---HKVRISDSALVSAAVLSNRYITDRFLPDKAIDLM  394 (853)
Q Consensus       329 l~RRFq~i~--V~Eps~~~t~~iL~gl~~~y-E~~---H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDll  394 (853)
T Consensus       599 LLSRFDLIylllD~~DE~~Dr~La~HivsLy~e~~~~~~~~~~d~~~lr~yi~yArk~i~p~l~~ea~~~l~  670 (804)
T KOG0478         599 LLSRFDLIFLLLDKPDERSDRRLADHIVALYPETGEKQGSEAIDMNLLRDYIRYARKNIHPALSPEASQALI  670 (804)
T ss_pred             HHHHHCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH
T ss_conf             643233789984275326778999999984145552102577868999999999742578655689999999