HHsearch alignment for GI: 254780877 and conserved domain: KOG0652

Probab=97.90  E-value=0.00016  Score=55.67  Aligned_cols=155  Identities=26%  Similarity=0.510  Sum_probs=70.5

Q ss_pred             HCCHHHHHHHHHHHHHHH--------HCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCC
Q ss_conf             459489999999999874--------101236566512898726786168899999998723776530022447740345
Q gi|254780877|r  570 VIGQSAAVESVSNALRRF--------RAGLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKH  641 (853)
Q Consensus       570 v~gq~~ai~~v~~~~~~~--------~~gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~  641 (853)
T Consensus       173 iGGldkQIqELvEAiVLpmth~ekF~~lgi~p---PKGv-LmYGPPGTGKTlmARAcAaqT---~aTFLKLA-----gPQ  240 (424)
T KOG0652         173 IGGLDKQIQELVEAIVLPMTHKEKFENLGIRP---PKGV-LMYGPPGTGKTLMARACAAQT---NATFLKLA-----GPQ  240 (424)
T ss_pred             CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCC---CCCE-EEECCCCCCHHHHHHHHHHHC---CCHHHHHC-----CHH
T ss_conf             32578999999988614565687887468889---9722-765799975779999998740---10688732-----647


Q ss_pred             CCCHHHCCCCHHCCCCCCCCCCH-----HHHCCCCCEEEEHHHHH----------C-CHHHHHHHHHHHH--CCEEECCC
Q ss_conf             32013047711203566774211-----32215641022021441----------4-9899999999840--45788799
Q gi|254780877|r  642 SVSRLIGSPPGYVGYEEGGALTE-----AVRRHPYQVVLFDEIEK----------A-HSDVHNILLQVLD--DGRLTDSQ  703 (853)
Q Consensus       642 ~vs~LiGappGYvG~~~gg~Lte-----~vr~~P~sVil~DEiEK----------a-h~~v~~~llqild--~G~ltd~~  703 (853)
T Consensus       241 LVQMfIG---------dGAkLVRDAFaLAKEkaP-~IIFIDElDAIGtKRfDSek~GDREVQRTMLELLNQLDGFss~~~  310 (424)
T KOG0652         241 LVQMFIG---------DGAKLVRDAFALAKEKAP-TIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDR  310 (424)
T ss_pred             HHHHHHC---------CHHHHHHHHHHHHHCCCC-EEEEEECHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf             7766533---------418899999987533498-389973002323343653123438999999999986048997562


Q ss_pred             CCEEECCCCEEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHH--CCCCCEEECCCCCHHHHHHHHHHHH
Q ss_conf             9778303315595485126876403267999999999862885772--6668158628899899999999999
Q gi|254780877|r  704 GRTVDFRNTLIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFL--NRLDEIILFEKLRKEDMAKIVRIQL  774 (853)
Q Consensus       704 G~~v~f~n~iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~pefl--nRid~iv~F~~l~~~~~~~i~~~~l  774 (853)
T Consensus       311 vKviAATNRvDi----------------------------LDPALlRSGRLDRKIEfP~Pne~aRarIlQIHs  355 (424)
T KOG0652         311 VKVIAATNRVDI----------------------------LDPALLRSGRLDRKIEFPHPNEEARARILQIHS  355 (424)
T ss_pred             EEEEEECCCCCC----------------------------CCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             678852164343----------------------------488886446644443488997789889998864