HHsearch alignment for GI: 254780877 and conserved domain: KOG0652
>KOG0652 consensus.
Probab=97.48 E-value=0.0036 Score=44.77 Aligned_cols=168 Identities=24% Similarity=0.338 Sum_probs=104.5
Q ss_pred CCCHHHHHHHHHHHH-------------CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHH
Q ss_conf 333578999999963-------------3677786689528874077799999998734899844457437887313542
Q gi|254780877|r 180 VIGRDDEMRRAIQVL-------------SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALI 246 (853)
Q Consensus 180 VIGRe~EI~~~~~iL-------------~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ 246 (853)
T Consensus 173 iGGldkQIqELvEAiVLpmth~ekF~~lgi~pPKGvLmYGPPGTGKTlmARAcAaqT~aT--FLKLAgPQLVQ------- 243 (424)
T KOG0652 173 IGGLDKQIQELVEAIVLPMTHKEKFENLGIRPPKGVLMYGPPGTGKTLMARACAAQTNAT--FLKLAGPQLVQ------- 243 (424)
T ss_pred CCCHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCH--HHHHCCHHHHH-------
T ss_conf 325789999999886145656878874688899722765799975779999998740106--88732647776-------
Q ss_pred CCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCCCCC--CCCC---------HHHHHHHHHCCCCEEEEEEEC
Q ss_conf 17454202454589999998607997699963627730266655--4335---------888876531246604899744
Q gi|254780877|r 247 AGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAGKTD--GAMD---------ASNLLKPSLARGELHCIGATT 315 (853)
Q Consensus 247 ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG~~~--g~~D---------aan~LKP~LarG~l~~IgaTT 315 (853)
T Consensus 244 ---MfIGdGAkLVRDAFaLAKE-kaP~IIFIDElDAI-GtKRfDSek~GDREVQRTMLELLNQLDGFss~~~vKviAATN 318 (424)
T KOG0652 244 ---MFIGDGAKLVRDAFALAKE-KAPTIIFIDELDAI-GTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATN 318 (424)
T ss_pred ---HHHCCHHHHHHHHHHHHHC-CCCEEEEEECHHHH-CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECC
T ss_conf ---6533418899999987533-49838997300232-334365312343899999999998604899756267885216
Q ss_pred HHHHHHHHHCCHHHHH--C-CCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 8999997300111320--2-3111115777678999999978986541496101
Q gi|254780877|r 316 LDEYRKYIEKDPALAR--R-FQSLLVGEPTVTDTISILRGLKERYEQHHKVRIS 366 (853)
Q Consensus 316 ~~Eyrk~iEkD~Al~R--R-Fq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~ 366 (853)
T Consensus 319 RvD-----iLDPALlRSGRLDRKIEfP~Pne~aRarIlQIHsRKMnv~~DvNfe 367 (424)
T KOG0652 319 RVD-----ILDPALLRSGRLDRKIEFPHPNEEARARILQIHSRKMNVSDDVNFE 367 (424)
T ss_pred CCC-----CCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 434-----3488886446644443488997789889998864005778887989