HHsearch alignment for GI: 254780877 and conserved domain: KOG0731
>KOG0731 consensus.
Probab=98.61 E-value=2.9e-07 Score=77.97 Aligned_cols=159 Identities=25% Similarity=0.402 Sum_probs=104.4
Q ss_pred CCCCCCHH---HHHHHHHHHH---------CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHH
Q ss_conf 53333357---8999999963---------36777866895288740777999999987348998444574378873135
Q gi|254780877|r 177 LDPVIGRD---DEMRRAIQVL---------SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGA 244 (853)
Q Consensus 177 LDPVIGRe---~EI~~~~~iL---------~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~ 244 (853)
T Consensus 310 FkDVAG~deAK~El~E~V~fLKNP~~Y~~lGAKiPkGvLL~GPPGTGKTLLAKAiAG---EAgVP-------F~svSGSE 379 (774)
T KOG0731 310 FKDVAGVDEAKEELMEFVKFLKNPEQYQELGAKIPKGVLLVGPPGTGKTLLAKAIAG---EAGVP-------FFSVSGSE 379 (774)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHC---CCCCC-------EEEECHHH
T ss_conf 010267089999999999984398999874776767517878999867899998853---05896-------46413378
Q ss_pred HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCC----CCCCCCCHHHHHHHHH-------CCCCEEEEEE
Q ss_conf 4217454202454589999998607997699963627730266----6554335888876531-------2466048997
Q gi|254780877|r 245 LIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAG----KTDGAMDASNLLKPSL-------ARGELHCIGA 313 (853)
Q Consensus 245 l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG----~~~g~~Daan~LKP~L-------arG~l~~Iga 313 (853)
T Consensus 380 FvE~~~g~~--asrvr~lf~~ar~-~aP~iifideida~~~~r~G~~~~~~~~e~e~tlnQll~emDgf~~~~~vi~~a~ 456 (774)
T KOG0731 380 FVEMFVGVG--ASRVRDLFPLARK-NAPSIIFIDEIDAVGRKRGGKGTGGGQDEREQTLNQLLVEMDGFETSKGVIVLAA 456 (774)
T ss_pred HHHHHCCCC--HHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf 888760343--4888999987432-6980797145420031255666678880788899988787527767784799811
Q ss_pred ECHHHHHHHHHCCHHHHH--CCCE-EECCCCCHHHHHHHHHHH
Q ss_conf 448999997300111320--2311-111577767899999997
Q gi|254780877|r 314 TTLDEYRKYIEKDPALAR--RFQS-LLVGEPTVTDTISILRGL 353 (853)
Q Consensus 314 TT~~Eyrk~iEkD~Al~R--RFq~-i~V~Eps~~~t~~iL~gl 353 (853)
T Consensus 457 tnr~-----d~ld~allrpGRfdr~i~i~~p~~~~r~~i~~~h 494 (774)
T KOG0731 457 TNRP-----DILDPALLRPGRFDRQIQIDLPDVKGRASILKVH 494 (774)
T ss_pred CCCC-----CCCCHHHCCCCCCCCCEECCCCCHHHHHHHHHHH
T ss_conf 6886-----6428876498755552324698514168999998