HHsearch alignment for GI: 254780877 and conserved domain: KOG0731

>KOG0731 consensus.
Probab=98.61  E-value=2.9e-07  Score=77.97  Aligned_cols=159  Identities=25%  Similarity=0.402  Sum_probs=104.4

Q ss_pred             CCCCCCHH---HHHHHHHHHH---------CCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHH
Q ss_conf             53333357---8999999963---------36777866895288740777999999987348998444574378873135
Q gi|254780877|r  177 LDPVIGRD---DEMRRAIQVL---------SRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGA  244 (853)
Q Consensus       177 LDPVIGRe---~EI~~~~~iL---------~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~  244 (853)
T Consensus       310 FkDVAG~deAK~El~E~V~fLKNP~~Y~~lGAKiPkGvLL~GPPGTGKTLLAKAiAG---EAgVP-------F~svSGSE  379 (774)
T KOG0731         310 FKDVAGVDEAKEELMEFVKFLKNPEQYQELGAKIPKGVLLVGPPGTGKTLLAKAIAG---EAGVP-------FFSVSGSE  379 (774)
T ss_pred             CCCCCCHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCEEEECCCCCCHHHHHHHHHC---CCCCC-------EEEECHHH
T ss_conf             010267089999999999984398999874776767517878999867899998853---05896-------46413378


Q ss_pred             HHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEECCHHHHCCCC----CCCCCCCHHHHHHHHH-------CCCCEEEEEE
Q ss_conf             4217454202454589999998607997699963627730266----6554335888876531-------2466048997
Q gi|254780877|r  245 LIAGAKFRGEFEERLKSLLCEIRSEDGEIILFIDELHVLVGAG----KTDGAMDASNLLKPSL-------ARGELHCIGA  313 (853)
Q Consensus       245 l~ag~~~rg~~e~r~~~i~~~~~~~~~~~ilfide~h~~~gaG----~~~g~~Daan~LKP~L-------arG~l~~Iga  313 (853)
T Consensus       380 FvE~~~g~~--asrvr~lf~~ar~-~aP~iifideida~~~~r~G~~~~~~~~e~e~tlnQll~emDgf~~~~~vi~~a~  456 (774)
T KOG0731         380 FVEMFVGVG--ASRVRDLFPLARK-NAPSIIFIDEIDAVGRKRGGKGTGGGQDEREQTLNQLLVEMDGFETSKGVIVLAA  456 (774)
T ss_pred             HHHHHCCCC--HHHHHHHHHHHHC-CCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEC
T ss_conf             888760343--4888999987432-6980797145420031255666678880788899988787527767784799811


Q ss_pred             ECHHHHHHHHHCCHHHHH--CCCE-EECCCCCHHHHHHHHHHH
Q ss_conf             448999997300111320--2311-111577767899999997
Q gi|254780877|r  314 TTLDEYRKYIEKDPALAR--RFQS-LLVGEPTVTDTISILRGL  353 (853)
Q Consensus       314 TT~~Eyrk~iEkD~Al~R--RFq~-i~V~Eps~~~t~~iL~gl  353 (853)
T Consensus       457 tnr~-----d~ld~allrpGRfdr~i~i~~p~~~~r~~i~~~h  494 (774)
T KOG0731         457 TNRP-----DILDPALLRPGRFDRQIQIDLPDVKGRASILKVH  494 (774)
T ss_pred             CCCC-----CCCCHHHCCCCCCCCCEECCCCCHHHHHHHHHHH
T ss_conf             6886-----6428876498755552324698514168999998