HHsearch alignment for GI: 254780877 and conserved domain: KOG0733
>KOG0733 consensus.
Probab=98.72 E-value=2.2e-06 Score=70.77 Aligned_cols=215 Identities=24% Similarity=0.432 Sum_probs=141.2
Q ss_pred HHHHCCCCH-HHHHHHCCCCHHHHHHHHHHHHCCCCCCCCC--CC---CCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHH
Q ss_conf 687277517-8899975999899999999873778878777--54---67610788644356998729853333357899
Q gi|254780877|r 114 AMVMETGGI-GESLKKCGLKFSRLEESIKKLRKGRVADSVN--AE---QGFDALKKYCRDLTEEARNGKLDPVIGRDDEM 187 (853)
Q Consensus 114 AIl~e~~s~-a~iL~~~gi~~~~l~e~i~~~~~~~~~~~~~--~e---~~~~~L~ky~~DLTe~Ar~GkLDPVIGRe~EI 187 (853)
T Consensus 463 ~i~~~~d~~S~E~~~~L~i~~eDF~~Al~~iQPSakREGF~tVPdVtW~dIGaL~~vR~eL~~aI~----~Pi--K~pd- 535 (802)
T KOG0733 463 AILNNPDPLSKELLEGLSIKFEDFEEALSKIQPSAKREGFATVPDVTWDDIGALEEVRLELNMAIL----API--KRPD- 535 (802)
T ss_pred HHHHCCCCCCHHHHCCCEECHHHHHHHHHHCCCCHHCCCCEECCCCCHHHCCCHHHHHHHHHHHHH----HHC--CCHH-
T ss_conf 997189986867735661019999999985593020365132699876641249999999999986----002--3888-
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHHHCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999633677786689528874077799999998734899844457437887313542174542024545899999986
Q gi|254780877|r 188 RRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGALIAGAKFRGEFEERLKSLLCEIR 267 (853)
Q Consensus 188 ~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l~ag~~~rg~~e~r~~~i~~~~~ 267 (853)
T Consensus 536 --~~k~lGi~~PsGvLL~GPPGCGKTLlAKAVANE----------ag~NFisVKGPELl--NkYVGESErAVR~vFqRAR 601 (802)
T KOG0733 536 --LFKALGIDAPSGVLLCGPPGCGKTLLAKAVANE----------AGANFISVKGPELL--NKYVGESERAVRQVFQRAR 601 (802)
T ss_pred --HHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHH----------CCCCEEEECCHHHH--HHHHHHHHHHHHHHHHHHH
T ss_conf --999828889872387579986188999998503----------04754762388999--8774237899999999862
Q ss_pred HCCCCEEEEECCHHHHCCCC---CCCCCCCHHHHHHHHH----CCCCEEEEEEECHHHHHHHHHCCHHHHH--CCCEE-E
Q ss_conf 07997699963627730266---6554335888876531----2466048997448999997300111320--23111-1
Q gi|254780877|r 268 SEDGEIILFIDELHVLVGAG---KTDGAMDASNLLKPSL----ARGELHCIGATTLDEYRKYIEKDPALAR--RFQSL-L 337 (853)
Q Consensus 268 ~~~~~~ilfide~h~~~gaG---~~~g~~Daan~LKP~L----arG~l~~IgaTT~~Eyrk~iEkD~Al~R--RFq~i-~ 337 (853)
T Consensus 602 ~s-aPCVIFFDEiDaL~p~R~~~~s~~s~RvvNqLLtElDGl~~R~gV~viaATNRPD---iI--DpAiLRPGRlDk~Ly 675 (802)
T KOG0733 602 AS-APCVIFFDEIDALVPRRSDEGSSVSSRVVNQLLTELDGLEERRGVYVIAATNRPD---II--DPAILRPGRLDKLLY 675 (802)
T ss_pred CC-CCEEEEECCHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC---CC--CHHHCCCCCCCCEEE
T ss_conf 38-9838985111202765577775058999999998731621114259995068976---55--565518775574245
Q ss_pred CCCCCHHHHHHHHHHHHH
Q ss_conf 157776789999999789
Q gi|254780877|r 338 VGEPTVTDTISILRGLKE 355 (853)
Q Consensus 338 V~Eps~~~t~~iL~gl~~ 355 (853)
T Consensus 676 V~lPn~~eR~~ILK~~tk 693 (802)
T KOG0733 676 VGLPNAEERVAILKTITK 693 (802)
T ss_pred ECCCCHHHHHHHHHHHHC
T ss_conf 069987889999999853