HHsearch alignment for GI: 254780877 and conserved domain: KOG0740
>KOG0740 consensus.
Probab=97.77 E-value=0.00054 Score=51.43 Aligned_cols=180 Identities=24% Similarity=0.297 Sum_probs=91.1
Q ss_pred HCCHHHHHHHHHHHHHHHHC---CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCHH
Q ss_conf 45948999999999987410---123656651289872678616889999999872377653002244774034532013
Q gi|254780877|r 570 VIGQSAAVESVSNALRRFRA---GLQDPQRPMGSFMFLGPTGVGKTELVKSLARLLFDDENSMIRIDMSEYMEKHSVSRL 646 (853)
Q Consensus 570 v~gq~~ai~~v~~~~~~~~~---gl~~~~~p~~~flf~GptGvGKTelak~la~~lf~~~~~lir~dMsey~e~~~vs~L 646 (853)
T Consensus 155 i~gl~~~k~~l~e~vi~p~lr~d~F~glr~p~rglLLfGPpgtGKtmL~~aiAsE~~a---tf--f~i-------SassL 222 (428)
T KOG0740 155 IAGLEDAKQSLKEAVILPLLRPDLFLGLREPVRGLLLFGPPGTGKTMLAKAIATESGA---TF--FNI-------SASSL 222 (428)
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCHHHEECCCCCCHHHHHHHHHHHHCC---EE--EEC-------CHHHH
T ss_conf 7405668998654232204553765235445311120058988447999999862066---57--630-------68886
Q ss_pred HCCCCHHCCCCCC-CCCCHHH-HCCCCCEEEEHHHHH--------CCHHH----HHHHHHHHHCCEEECCCCCEEECCCC
Q ss_conf 0477112035667-7421132-215641022021441--------49899----99999984045788799977830331
Q gi|254780877|r 647 IGSPPGYVGYEEG-GALTEAV-RRHPYQVVLFDEIEK--------AHSDV----HNILLQVLDDGRLTDSQGRTVDFRNT 712 (853)
Q Consensus 647 iGappGYvG~~~g-g~Lte~v-r~~P~sVil~DEiEK--------ah~~v----~~~llqild~G~ltd~~G~~v~f~n~ 712 (853)
T Consensus 223 tsK---~~Ge~eK~vralf~vAr~~qPsvifidEidslls~Rs~~e~e~srr~ktefLiq~~--~~~s~~~d------rv 291 (428)
T KOG0740 223 TSK---YVGESEKLVRALFKVARSLQPSVIFIDEIDSLLSKRSDNEHESSRRLKTEFLLQFD--GKNSAPDD------RV 291 (428)
T ss_pred HHH---CCCHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHC--CCCCCCCC------EE
T ss_conf 532---46707789999999987139708984025678863687545445556557776540--44578887------07
Q ss_pred EEEECCCHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEECH
Q ss_conf 55954851268764032679999999998628857726668158628899899999999999999999985798999988
Q gi|254780877|r 713 LIIMTSNLGAEYLIEDGDSVHDKVMGIVRSAFKPEFLNRLDEIILFEKLRKEDMAKIVRIQLGRVLSLIKERNISMDFDD 792 (853)
Q Consensus 713 iii~TsN~G~~~~~~~~~~~~~~~~~~l~~~f~peflnRid~iv~F~~l~~~~~~~i~~~~l~~l~~~l~~~~i~l~~~~ 792 (853)
T Consensus 292 lvigaTN~--------P~e~De----a~~R--------rf~kr~yiplPd~etr~~~~~~ll-------~~~--~~~l~~ 342 (428)
T KOG0740 292 LVIGATNR--------PWELDE----AARR--------RFVKRLYIPLPDYETRSLLWKQLL-------KEQ--PNGLSD 342 (428)
T ss_pred EEEECCCC--------CHHHHH----HHHH--------HHCCEEEECCCCHHHHHHHHHHHH-------HHC--CCCCCH
T ss_conf 99815888--------367788----8888--------710315535988789999999999-------768--787417
Q ss_pred HHHHHHHHC
Q ss_conf 999999970
Q gi|254780877|r 793 QVIDWLSCR 801 (853)
Q Consensus 793 ~~~~~l~~~ 801 (853)
T Consensus 343 ~d~~~l~~~ 351 (428)
T KOG0740 343 LDISLLAKV 351 (428)
T ss_pred HHHHHHHHH
T ss_conf 789999988