HHsearch alignment for GI: 254780877 and conserved domain: KOG0741

Probab=99.42  E-value=1.7e-11  Score=112.43  Aligned_cols=195  Identities=27%  Similarity=0.444  Sum_probs=119.0

Q ss_pred             HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEE
Q ss_conf             78864435699872985333335789999999633677786689528874077799999998734899844457437887
Q gi|254780877|r  161 LKKYCRDLTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMAL  240 (853)
Q Consensus       161 L~ky~~DLTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~l  240 (853)
T Consensus       226 Ld~EFs~IFRRAFAsRvFpp--------~vie~lGi~HVKGiLLyGPPGTGKTLiARqIGkML-NArePKIVNGPeIL--  294 (744)
T KOG0741         226 LDKEFSDIFRRAFASRVFPP--------EVIEQLGIKHVKGILLYGPPGTGKTLIARQIGKML-NAREPKIVNGPEIL--  294 (744)
T ss_pred             CHHHHHHHHHHHHHHHCCCH--------HHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHH-CCCCCCCCCCHHHH--
T ss_conf             11789999999877632998--------89987195112357887799987018999987874-57998634757889--


Q ss_pred             EHHHHHCCCCCCCHHHHHHHHHHHHHHHC-------CCCEEEEECCHHHHCC-CCCCCCC---CC-HHHHHHHHH----C
Q ss_conf             31354217454202454589999998607-------9976999636277302-6665543---35-888876531----2
Q gi|254780877|r  241 DMGALIAGAKFRGEFEERLKSLLCEIRSE-------DGEIILFIDELHVLVG-AGKTDGA---MD-ASNLLKPSL----A  304 (853)
Q Consensus       241 d~~~l~ag~~~rg~~e~r~~~i~~~~~~~-------~~~~ilfide~h~~~g-aG~~~g~---~D-aan~LKP~L----a  304 (853)
T Consensus       295 --------~KYVGeSE~NvR~LFaDAEeE~r~~g~~SgLHIIIFDEiDAICKqRGS~~g~TGVhD~VVNQLLsKmDGVeq  366 (744)
T KOG0741         295 --------NKYVGESEENVRKLFADAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHDTVVNQLLSKMDGVEQ  366 (744)
T ss_pred             --------HHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHH
T ss_conf             --------876063078899998757999984376677259996346799974488789886318999999985322876


Q ss_pred             CCCEEEEEEECHHHHHHHHHCCHHHHH--CCCE-EECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
Q ss_conf             466048997448999997300111320--2311-111577767899999997898654149610158999998633320
Q gi|254780877|r  305 RGELHCIGATTLDEYRKYIEKDPALAR--RFQS-LLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRY  380 (853)
Q Consensus       305 rG~l~~IgaTT~~Eyrk~iEkD~Al~R--RFq~-i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rY  380 (853)
T Consensus       367 LNNILVIGMTNR~D---lI--DEALLRPGRlEVqmEIsLPDE~gRlQIl~IHT~rMre~~~l-~~dVdl~elA~lTKNf  439 (744)
T KOG0741         367 LNNILVIGMTNRKD---LI--DEALLRPGRLEVQMEISLPDEKGRLQILKIHTKRMRENNKL-SADVDLKELAALTKNF  439 (744)
T ss_pred             HHCEEEEECCCCHH---HH--HHHHCCCCCEEEEEEEECCCCCCCEEEEEHHHHHHHHCCCC-CCCCCHHHHHHHHCCC
T ss_conf             61678994047366---67--88755887169999984688767278887144556651787-7776989999985578