HHsearch alignment for GI: 254780877 and conserved domain: KOG0989

Probab=98.26  E-value=6e-05  Score=59.14  Aligned_cols=204  Identities=22%  Similarity=0.263  Sum_probs=143.0

Q ss_pred             HHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCHHHCCCEEEEEEHHHH
Q ss_conf             43569987298533333578999999963367778668952887407779999999873489984445743788731354
Q gi|254780877|r  166 RDLTEEARNGKLDPVIGRDDEMRRAIQVLSRRTKNNPVLIGDPGVGKTAIIEGLASRIINGDIPESLKGKRLMALDMGAL  245 (853)
Q Consensus       166 ~DLTe~Ar~GkLDPVIGRe~EI~~~~~iL~r~~k~n~~lvGe~GvGKtaive~la~~i~~~~vp~~l~~~~i~~ld~~~l  245 (853)
T Consensus        24 ~swteKYrPkt~de~~gQe~vV~~L~~a~~~~~lp~~LFyGPpGTGKTStalafar~L~~----~~~~~~rvl~lnaSde   99 (346)
T KOG0989          24 RSWTEKYRPKTFDELAGQEHVVQVLKNALLRRILPHYLFYGPPGTGKTSTALAFARALNC----EQLFPCRVLELNASDE   99 (346)
T ss_pred             CCHHHHHCCCCHHHHCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCC----CCCCCCCHHHHCCCCC
T ss_conf             553787478737765015999999999986068860786689998676899999998557----4235554243136600


Q ss_pred             HCCCCCCCHHHHHHHHHHHHHH-----HCCCCEEEEECCHHHHCCCCCCCCCCCHHHHHHHHHCC--CCEEEEEEECHHH
Q ss_conf             2174542024545899999986-----07997699963627730266655433588887653124--6604899744899
Q gi|254780877|r  246 IAGAKFRGEFEERLKSLLCEIR-----SEDGEIILFIDELHVLVGAGKTDGAMDASNLLKPSLAR--GELHCIGATTLDE  318 (853)
Q Consensus       246 ~ag~~~rg~~e~r~~~i~~~~~-----~~~~~~ilfide~h~~~gaG~~~g~~Daan~LKP~Lar--G~l~~IgaTT~~E  318 (853)
T Consensus       100 -rGisvvr~Kik~fakl~~~~~~~~~~~~~~fKiiIlDEcdsmt--------sdaq~aLrr~mE~~s~~trFiLIcnyls  170 (346)
T KOG0989         100 -RGISVVREKIKNFAKLTVLLKRSDGYPCPPFKIIILDECDSMT--------SDAQAALRRTMEDFSRTTRFILICNYLS  170 (346)
T ss_pred             -CCCCCHHHHHCCHHHHHHCCCCCCCCCCCCCEEEEEECHHHHH--------HHHHHHHHHHHHCCCCCEEEEEECCCHH
T ss_conf             -1431006652379987502556567889863289974164530--------9999999999862546659999738856


Q ss_pred             HHHHHHCCHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
Q ss_conf             9997300111320231111157776789999999789865414961015899999863332024576747789999999
Q gi|254780877|r  319 YRKYIEKDPALARRFQSLLVGEPTVTDTISILRGLKERYEQHHKVRISDSALVSAAVLSNRYITDRFLPDKAIDLMDEA  397 (853)
Q Consensus       319 yrk~iEkD~Al~RRFq~i~V~Eps~~~t~~iL~gl~~~yE~~H~V~i~d~al~~av~ls~rYi~~r~lPDKAIDllDeA  397 (853)
T Consensus       171 --rii---~pi~SRC~KfrFk~L~d~~iv~rL~~Ia~~----E~v~~d~~al~~I~~~S~GdLR------~Ait~Lqsl  234 (346)
T KOG0989         171 --RII---RPLVSRCQKFRFKKLKDEDIVDRLEKIASK----EGVDIDDDALKLIAKISDGDLR------RAITTLQSL  234 (346)
T ss_pred             --HCC---HHHHHHHHHHCCCCCCHHHHHHHHHHHHHH----HCCCCCHHHHHHHHHHCCCCHH------HHHHHHHHH
T ss_conf             --477---287746777128876447899999999888----5899787899999997387289------999999986